| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1365 |
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| Symbol | |
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| ID | 5080560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1549195 |
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| End bp | 1550073 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640498497 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001182892 |
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| Protein GI | 146292468 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGACT TTGGTTTAGC AACAGTGTTG TACCCTGAGG AATACGGCTA CCAAGCAGAT
ATATACAGTC CAAATGCACC ACCGTTGGAT TTAGTTCAAG TGCTCCAACA GCTACATGCC
AGTTTAGATC CTCGGACAGT CTTTGCCTGC TATGGCAAAA TGCTGGAACA ATACTTGCCT
ATTCAAGGAG TACGTCTACT CAGCAATGTG CATAAATTAA CTTGGGGTAA ACGTTACGGT
ATCAGTTTAA AACATCAATT GATTTGCAAT GGTGTTTCGC TCAACATCCA ATATCAATTA
CTCACGCCAC TGACACCGTC ACAATCGGCA CTTTTACAAG AATTAGAGCC CTTATTACAA
CAACCGCTAG CCAATGCCAT CTTGTACCAA GAAATGTCAA CGCAGGCGAT GTTTGACTCG
CTTACAGGCT TAGGTAATCG TCATTACTAC AACCAAAGCC TTAAAAAGGC CATTGCTAGG
GCCCATCGTA AACAAGGCGT AATATCATTA GTTGTGTTGG ATTTAGATAA CTTCAAACAA
CTCAACGATA AATTTGGCCA TAAATGCGGT GACTATATTC TTAAAGAATT TGGTGACGTT
ATTCGCAACA CGATCCGTAA TACGGATCAG GCATTTCGCA TTGGTGGTGA TGAGTTTGTG
GTTATCGTTC AAGGAACTAT CCAAGCTGCA AGTTTATTAT GCGAACGAAT AGTCACAGGC
ACAAATCAGC ATCATTGTTT TAATCAGTTT GGGGTAAGTT GTAGTTTAGG TGCAGCAGAG
TCTAACGATA TTCTAGAGGC TGAACAGTTG TATGAATTAG CCGATAAAGC CTTATATCAA
GCTAAGGCAT CAGGTCGCAA TGGTTATAAA CTAGGCTAA
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| Protein sequence | MMDFGLATVL YPEEYGYQAD IYSPNAPPLD LVQVLQQLHA SLDPRTVFAC YGKMLEQYLP
IQGVRLLSNV HKLTWGKRYG ISLKHQLICN GVSLNIQYQL LTPLTPSQSA LLQELEPLLQ
QPLANAILYQ EMSTQAMFDS LTGLGNRHYY NQSLKKAIAR AHRKQGVISL VVLDLDNFKQ
LNDKFGHKCG DYILKEFGDV IRNTIRNTDQ AFRIGGDEFV VIVQGTIQAA SLLCERIVTG
TNQHHCFNQF GVSCSLGAAE SNDILEAEQL YELADKALYQ AKASGRNGYK LG
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