Gene Sputcn32_1229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1229 
SymbolsmpB 
ID5081541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp1371649 
End bp1372140 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content46% 
IMG OID640498361 
ProductSsrA-binding protein 
Protein accessionYP_001182756 
Protein GI146292332 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0691] tmRNA-binding protein 
TIGRFAM ID[TIGR00086] SsrA-binding protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAAGA AAAAATCAAG CAAAGCCGCG CCTGCGACTA TCGCACGTAA TAAGCGCGCA 
ACCTTCGAAT ACCGATTCGA AGAGAAAATG GAAGCTGGTC TATCCCTTAT GGGATGGGAA 
GTGAAGTCTA TCCGTATGGG TAAGGTCAAC TTGTCCGACT GTTACGTATT CCTGAAAAAT 
GGTGAAGCCT TTATGCATGG CTGCACCATT ATTCCCTTGA ATACAGCATC AACACACGTT 
GTCTGCGATC CCCTGCGTTT GAAAAAACTG CTACTCAGCC GTAAAGAGCT AGATAAACTG 
GCTGGTTTAG TAGAGCGCCA AGGCTACTCC ATTATTCCTA TCTCTATGTA CTGGCGCAAA 
GGTGCATGGG TGAAAGTGGA AATTGGCCTA GGTAAGGGTA AGAAAGATCA CGACAAGCGC 
GAAGATACTA AAGCGCGTGA ATGGGAAGTT GAAAAAGCCC GCGTGATGAA AAAAGAAAAA 
ACGCACGGAT AA
 
Protein sequence
MVKKKSSKAA PATIARNKRA TFEYRFEEKM EAGLSLMGWE VKSIRMGKVN LSDCYVFLKN 
GEAFMHGCTI IPLNTASTHV VCDPLRLKKL LLSRKELDKL AGLVERQGYS IIPISMYWRK 
GAWVKVEIGL GKGKKDHDKR EDTKAREWEV EKARVMKKEK THG