Gene Sputcn32_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1165 
Symbol 
ID5081575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp1306226 
End bp1307497 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content42% 
IMG OID640498296 
Producthypothetical protein 
Protein accessionYP_001182692 
Protein GI146292268 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4536] Putative Mg2+ and Co2+ transporter CorB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.132593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGACGCTA TATCGACAAG CGCACTCCTT ATTTTCCTAC TAGTGCTCAT CATGTTCTCC 
GCCTATTTTT CAGGCTCAGA AACCGCCATG ATGACCCTCA ATCGTTATCG TTTAAGACAC
CTCGCCTCCA ATGGCCATAA AGGCGCTATA CGGGCATTAA AATTGTTAGA ACGACCAGAT
CGACTTATCG GCCTTATTCT GATCGGCAAT AACTTAGTCA ATATATTAGC TTCTGCTATT
GCGACTATCA TCGGAATGCG ACTTTGGGGA GATTTAGGTG TTGCCATTGC AACAGGGGTG
CTCACCTTAG TCGTGTTAGT CTTTGCCGAA GTTACGCCTA AAACTATCGC CGCCTTGAAT
CCTGAGCGGA TTGCCTTCCC ATCCAGTGTA CTCTTACGTT GGTTGTTAGT CTTATTAGCA
CCATTGGTAA AGGGAGTTAA TTTAATCACC TCCGGATTTC TACGTTTAAT GGGCATTAAA
ACCGTTAATA GCAGCGATGC CTTAAGCCAA GAAGAATTAC GTACTGTCGT ACATGAGGCC
GGAGCACTTA TCCCCCAACG TCACCAAGAA ATGTTGTTAT CTATTTTGGA CTTAGAGAAA
GTCACCGTTG AAGATATTAT GGTGCCACGC TCTGATCTCT ATGCGATCAA TGTGAATGAT
GAGTTTAAGG TTATCAATCG CCAAGTTATC CAAAGTCCCC ATACTCGAGT ATTGGTGTAC
CGCGATACGA TTGACGATGC GGTGGGTTTT ATCCATTTAC GCGATGCATT ACGCCTACAA
TCAAAAAAAC AATTTAGTAA ATCATCACTG CTCCGCGCAG TAAAAGAGCT TTATTTTATT
CCAGAAGGGA CACCGCTTAA TGTCCAACTA GCTAATTTTC AACAAAATAA AGAACGGATT
GGTTTGGTGG TTGACGAATA TGGCGATATT CAAGGCTTAG TAACGCTGGA AGATATCCTA
GAAGAAATTG TAGGCGATTT CACCACTTCA ATGGTTACAG CACCAAGTGA AGATATTACT
GTGCAGCAGG ATGGCAGCTA TTTAGTGGAT GCTAGCATTA CAATTCGTGA TTTAAATAAA
GAAATGAAGT GGGATTTCCC AACAGATGGG CCTAAGACAC TTAATGGGCT AATTTTAGAA
TACCTAGAAG ATATTCCTTC AGAAAACACT AGCTTACGCC TAGCAGGCTA TCCGATAGAA
GTCATAGAAG TTGCCGATAA CATGGTAAAA ACAGTGCGAG TTATTCCTCT ACATTACCAT
CCACCTCGTT AG
 
Protein sequence
MDAISTSALL IFLLVLIMFS AYFSGSETAM MTLNRYRLRH LASNGHKGAI RALKLLERPD 
RLIGLILIGN NLVNILASAI ATIIGMRLWG DLGVAIATGV LTLVVLVFAE VTPKTIAALN
PERIAFPSSV LLRWLLVLLA PLVKGVNLIT SGFLRLMGIK TVNSSDALSQ EELRTVVHEA
GALIPQRHQE MLLSILDLEK VTVEDIMVPR SDLYAINVND EFKVINRQVI QSPHTRVLVY
RDTIDDAVGF IHLRDALRLQ SKKQFSKSSL LRAVKELYFI PEGTPLNVQL ANFQQNKERI
GLVVDEYGDI QGLVTLEDIL EEIVGDFTTS MVTAPSEDIT VQQDGSYLVD ASITIRDLNK
EMKWDFPTDG PKTLNGLILE YLEDIPSENT SLRLAGYPIE VIEVADNMVK TVRVIPLHYH
PPR