Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1165 |
Symbol | |
ID | 5081575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1306226 |
End bp | 1307497 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640498296 |
Product | hypothetical protein |
Protein accession | YP_001182692 |
Protein GI | 146292268 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.132593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGACGCTA TATCGACAAG CGCACTCCTT ATTTTCCTAC TAGTGCTCAT CATGTTCTCC GCCTATTTTT CAGGCTCAGA AACCGCCATG ATGACCCTCA ATCGTTATCG TTTAAGACAC CTCGCCTCCA ATGGCCATAA AGGCGCTATA CGGGCATTAA AATTGTTAGA ACGACCAGAT CGACTTATCG GCCTTATTCT GATCGGCAAT AACTTAGTCA ATATATTAGC TTCTGCTATT GCGACTATCA TCGGAATGCG ACTTTGGGGA GATTTAGGTG TTGCCATTGC AACAGGGGTG CTCACCTTAG TCGTGTTAGT CTTTGCCGAA GTTACGCCTA AAACTATCGC CGCCTTGAAT CCTGAGCGGA TTGCCTTCCC ATCCAGTGTA CTCTTACGTT GGTTGTTAGT CTTATTAGCA CCATTGGTAA AGGGAGTTAA TTTAATCACC TCCGGATTTC TACGTTTAAT GGGCATTAAA ACCGTTAATA GCAGCGATGC CTTAAGCCAA GAAGAATTAC GTACTGTCGT ACATGAGGCC GGAGCACTTA TCCCCCAACG TCACCAAGAA ATGTTGTTAT CTATTTTGGA CTTAGAGAAA GTCACCGTTG AAGATATTAT GGTGCCACGC TCTGATCTCT ATGCGATCAA TGTGAATGAT GAGTTTAAGG TTATCAATCG CCAAGTTATC CAAAGTCCCC ATACTCGAGT ATTGGTGTAC CGCGATACGA TTGACGATGC GGTGGGTTTT ATCCATTTAC GCGATGCATT ACGCCTACAA TCAAAAAAAC AATTTAGTAA ATCATCACTG CTCCGCGCAG TAAAAGAGCT TTATTTTATT CCAGAAGGGA CACCGCTTAA TGTCCAACTA GCTAATTTTC AACAAAATAA AGAACGGATT GGTTTGGTGG TTGACGAATA TGGCGATATT CAAGGCTTAG TAACGCTGGA AGATATCCTA GAAGAAATTG TAGGCGATTT CACCACTTCA ATGGTTACAG CACCAAGTGA AGATATTACT GTGCAGCAGG ATGGCAGCTA TTTAGTGGAT GCTAGCATTA CAATTCGTGA TTTAAATAAA GAAATGAAGT GGGATTTCCC AACAGATGGG CCTAAGACAC TTAATGGGCT AATTTTAGAA TACCTAGAAG ATATTCCTTC AGAAAACACT AGCTTACGCC TAGCAGGCTA TCCGATAGAA GTCATAGAAG TTGCCGATAA CATGGTAAAA ACAGTGCGAG TTATTCCTCT ACATTACCAT CCACCTCGTT AG
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Protein sequence | MDAISTSALL IFLLVLIMFS AYFSGSETAM MTLNRYRLRH LASNGHKGAI RALKLLERPD RLIGLILIGN NLVNILASAI ATIIGMRLWG DLGVAIATGV LTLVVLVFAE VTPKTIAALN PERIAFPSSV LLRWLLVLLA PLVKGVNLIT SGFLRLMGIK TVNSSDALSQ EELRTVVHEA GALIPQRHQE MLLSILDLEK VTVEDIMVPR SDLYAINVND EFKVINRQVI QSPHTRVLVY RDTIDDAVGF IHLRDALRLQ SKKQFSKSSL LRAVKELYFI PEGTPLNVQL ANFQQNKERI GLVVDEYGDI QGLVTLEDIL EEIVGDFTTS MVTAPSEDIT VQQDGSYLVD ASITIRDLNK EMKWDFPTDG PKTLNGLILE YLEDIPSENT SLRLAGYPIE VIEVADNMVK TVRVIPLHYH PPR
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