Gene Sputcn32_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1108 
Symbol 
ID5081618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1247602 
End bp1248618 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content48% 
IMG OID640498239 
Productputative DNA-binding/iron metalloprotein/AP endonuclease 
Protein accessionYP_001182635 
Protein GI146292211 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00000360388 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGTTT TAGGTATTGA AACATCCTGT GATGAGACAG GTATTGCCGT CTATGACGAT 
AAGCTAGGGT TGTTATCCCA TGCTCTATAT AGTCAAGTGA AGTTGCATGC AGATTACGGT 
GGTGTGGTGC CTGAGTTAGC CTCCCGCGAC CATGTTCGTA AAATTGTGCC GCTTATTCGC 
CAAGCCTTAA AAAATGCTGA TACTAAAATC GCCGATTTAG ATGGTATTGC TTACACTAAA 
GGCCCCGGTT TAATTGGTGC GCTCTTAGTT GGAGCTTGCG TTGGGCGTTC GCTTGCTTTT 
GCTTGGAATA AGCCTGCTAT TGGTGTGCAC CATATGGAAG GGCATCTGCT CGCACCTATG 
CTTGAAGAGG ATGCACCTGA GTTTCCCTTT GTTGCCTTGT TGGTTTCAGG TGGCCATTCC 
ATGCTGGTTA AAGTCGATGG CATTGGCCTT TATGAAGTCT TAGGTGAGTC TGTGGATGAT 
GCTGCAGGTG AAGCTTTTGA CAAAACGGCT AAATTGATGG GCTTAGATTA TCCAGGAGGC 
CCAAGACTTG CTAAGTTAGC CGCTACAGGA GTTCCCGCTG GCTATCAGTT TCCCCGTCCA 
ATGACGGATA GGCCTGGTCT GGATTTTAGC TTTTCAGGCC TAAAGACATT TACGGCAAAT 
ACAATAGCCG CAGAGCCTGA TGATGAGCAA ACCCGCGCCA ATATCGCTAG AGCCTTTGAA 
GAAGCGGTGG TTGATACTTT AGCAATTAAG TGCCGCAGAG CCTTAAAGCT AACAGGCTAT 
AACCGTTTAG TGATCGCCGG TGGTGTCAGT GCCAATACCC GTTTACGGGC AACGCTAGCT 
GAAGTGATGA CTTCAATTGG TGGGAAAGTT TATTATCCTA GAGGAGAGTT TTGCACCGAC 
AATGGTGCAA TGATTGCCTA TGCAGGGTTG CAGCGTTTAA AGGCTGGGCA GCGTGAAGAT 
CTTGCGGTAA AAGGTCAACC AAGGTGGCCG CTAGACACTT TGCCACCGCT GTTCTAA
 
Protein sequence
MRVLGIETSC DETGIAVYDD KLGLLSHALY SQVKLHADYG GVVPELASRD HVRKIVPLIR 
QALKNADTKI ADLDGIAYTK GPGLIGALLV GACVGRSLAF AWNKPAIGVH HMEGHLLAPM 
LEEDAPEFPF VALLVSGGHS MLVKVDGIGL YEVLGESVDD AAGEAFDKTA KLMGLDYPGG 
PRLAKLAATG VPAGYQFPRP MTDRPGLDFS FSGLKTFTAN TIAAEPDDEQ TRANIARAFE 
EAVVDTLAIK CRRALKLTGY NRLVIAGGVS ANTRLRATLA EVMTSIGGKV YYPRGEFCTD 
NGAMIAYAGL QRLKAGQRED LAVKGQPRWP LDTLPPLF