| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1097 |
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| Symbol | |
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| ID | 5081705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1231569 |
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| End bp | 1232384 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498227 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001182624 |
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| Protein GI | 146292200 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0724945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT TAAGTTTTTC TTCTGTGATG TTGTGGTTCG GACTGATTTT TTTGTACGCA
CCTATGCTGA TCCTTGTTAT TTACTCATTT AATGACTCCA AGCTCGTGAC CGTTTGGGGA
GGATTTTCCC CTAAATGGTA TGGTGAATTA TTTCAAGATC AACAGATTTT AGATGCCGTA
TGGACCAGTC TGCGTATAGC GTTTTATAGC TCAACCATGG CGGTCATTAT CGGCACTATG
GCAGCCTTTG TGATGACACG TTTTAAGCGT TCATGGGCAA AGCTGACTCT GTCGAACATG
ATTACCGCCC CGTTGGTAAT GCCTGAGGTG ATCACAGGTT TGTCTTTGCT TTTACTGTTT
GTGCATATGG CAGATTTATT GGGCTGGCCT AGGGAACGGG GCATGGTGAC AGTGTGGATT
GCACACTCAA CATTTTGTGC CGCCTATGTA GCTGTGGTGG TGTCATCAAG ATTACGTGAG
CTAGATATGT CAATCGAAGA GGCCGCTATG GACTTAGGCG CTACCCCGCT AAAGACCTTT
TTCCTTATCA CTGTGCCCAT TATTTCTCCA GCATTAATGG CGGGGTGGCT ATTGTCCTTT
AGCTTGTCAT TAGATGATTT AGTGATCGCA AGCTTTGCCT CGGGCCCGGG TGCTACGACC
TTGCCTATGG TGGTGTTCTC TTCGGTACGT TTAGGGGTTT CACCGAAGAT TAATGCCTTG
GCAACGCTGA TCATACTGTG TGTTTCACTC ATCGCTTTCC TTTCTTGGTA TATGGCAAGG
CGGGCAGAGA AACGTGACCG TACACCAATG AATTAG
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| Protein sequence | MKKLSFSSVM LWFGLIFLYA PMLILVIYSF NDSKLVTVWG GFSPKWYGEL FQDQQILDAV
WTSLRIAFYS STMAVIIGTM AAFVMTRFKR SWAKLTLSNM ITAPLVMPEV ITGLSLLLLF
VHMADLLGWP RERGMVTVWI AHSTFCAAYV AVVVSSRLRE LDMSIEEAAM DLGATPLKTF
FLITVPIISP ALMAGWLLSF SLSLDDLVIA SFASGPGATT LPMVVFSSVR LGVSPKINAL
ATLIILCVSL IAFLSWYMAR RAEKRDRTPM N
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