Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1065 |
Symbol | |
ID | 5081673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1191237 |
End bp | 1191671 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640498195 |
Product | type IV pilus assembly protein PilX |
Protein accession | YP_001182592 |
Protein GI | 146292168 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAC AGCGTGGAAT AGTGCTTTTT TTTGCACTGA TTGTATTGAT CATTATGACC GTCATTGGTG TTGCATTGGC TGTCAATTCT ACGCAATCAC TTCGTATGTC AGGCGCAGGT TCTGAACGAA TTGAGGCAAA AGCGCTTGCT GATGGTGGTT TACAGCAGGT TATTACAAAT TACCAAGGGG CACTTTTTGC TAACCTTGGC TTAGTAACTT CGGAAACTCT CTTTAATGGA ACGCAGCAAT TAACTCCGCT CCCACTTACT GGAGTTAGGG ATGTTAGTTG TCAGCGAACA GACAGGGCGA CTGGCGCTAA TTTAGTGAGT TGTCGACGAG TAGAAATTAG CAGTACAACA ACGTTTGGTC GAGACAATTT AGGGCAGATC ACTGTTGTTG CTGGGATTGA ACAGCAAGTA CTAACAGGAA ATTAA
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Protein sequence | MSKQRGIVLF FALIVLIIMT VIGVALAVNS TQSLRMSGAG SERIEAKALA DGGLQQVITN YQGALFANLG LVTSETLFNG TQQLTPLPLT GVRDVSCQRT DRATGANLVS CRRVEISSTT TFGRDNLGQI TVVAGIEQQV LTGN
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