Gene Sputcn32_1060 details

Gene Information

• Locus tag: Sputcn32_1060
• Symbol: lspA
• ID: 5081668
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 1187580
• End bp: 1188095
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640498190
• Product: lipoprotein signal peptidase
• Protein accession: YP_001182587
• Protein GI: 146292163
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.189146
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCATTAA CTTGGAAAGA CAGTGGCTTA CGTTGGTATT GGGTAGCTGT GTTGGTGTTT 
TTAGCCGATC AGCTATCTAA GCAATGGGTC TTAGCCAATT TTGATTTGTT TGAATCGGTG 
CAGTTATTGC CCTTTTTTAA TTTTACTTAC GTACGTAACT ACGGTGCAGC TTTTAGCTTT 
TTAAGTGAAG CCGGAGGCTG GCAACGCTGG TTGTTTACGA TTGTCGCAGT TGGATTCAGT 
ACTTTACTGA CGGTATGGTT GCGTAAGCAA TCGGCTTCTT TGTGGAAGCT GAATCTGGCC 
TACACCTTAG TGATTGGTGG TGCCCTAGGC AATTTAGTCG ACAGATTAAT GCACGGTTTC 
GTGGTTGATT TTATCGATTT CTTTTGGGGT AAGAGCCACT ACCCAGCATT CAATATCGCC 
GATTCGGCGA TTTGTATTGG TGCTGTGTTG ATCATTTGGG ATGCATTTTT AAGCGGTAAA 
TCAGAGCAAG ATACAACCGA AGGAGTTAAG AAGTGA 

 

Protein sequence

MPLTWKDSGL RWYWVAVLVF LADQLSKQWV LANFDLFESV QLLPFFNFTY VRNYGAAFSF 
LSEAGGWQRW LFTIVAVGFS TLLTVWLRKQ SASLWKLNLA YTLVIGGALG NLVDRLMHGF 
VVDFIDFFWG KSHYPAFNIA DSAICIGAVL IIWDAFLSGK SEQDTTEGVK K