Gene Sputcn32_0974 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0974 
Symbol 
ID5081787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1087949 
End bp1088563 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content44% 
IMG OID640498099 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001182502 
Protein GI146292078 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.253527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTGA GTACTTGGTT TGGTTTATTG GCAATTTGTT GTTTGGGAGC TATGTCTCCG 
GGGCTAAGTT TAGCCATGGT GGTACGTCAT ACGTTAGGGG GTGGACGTAG TAAAGGGATT 
GTTTGTGCAT GGGCGCATTC TATCGGGATC GGTTTTTATG CCTTGATCAC GTTATTGGGT 
CTAGCCGTAG CCCTAAAAAA AGCCCCTTTA CTATTTAATG GAATTGCAAT TATGGGGGCT 
TTATATCTAG CCTGGATTGG TATTCAGTCG CTGCGCTCAA ATGGTGGTGT GCAAGCAAAA 
CTTGCTGCCG GAGAAGCAAC TGATACATTC ACTGCGGCGA GGGATGGATT AGCTATCTCT 
CTTTTTAACC CCAAAATCCT ACTGTTTTTT TTGGCGCTGT TTAGCCAGTT TGTCATGGTG 
GCAGATAGCA TGACAGGGCA GGACTTGATT GTTTTGACCC CTTTAATCGT GGACGGTCTT 
TGGTATAGCT TAGTTGCGTT AATGTTGTCT CATTCGCGGG TGTTACCTAA ACTTCGAGAA 
AAGGCGGGTT TGATTGATAA ATTAACCGGT ATCGTCTTAA TACTGTTAGC CATTCGAGTG 
ATTTATACGC TTTAA
 
Protein sequence
MSLSTWFGLL AICCLGAMSP GLSLAMVVRH TLGGGRSKGI VCAWAHSIGI GFYALITLLG 
LAVALKKAPL LFNGIAIMGA LYLAWIGIQS LRSNGGVQAK LAAGEATDTF TAARDGLAIS 
LFNPKILLFF LALFSQFVMV ADSMTGQDLI VLTPLIVDGL WYSLVALMLS HSRVLPKLRE 
KAGLIDKLTG IVLILLAIRV IYTL