Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0934 |
Symbol | |
ID | 5081846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1043437 |
End bp | 1044645 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640498059 |
Product | rRNA (guanine-N(2)-)-methyltransferase |
Protein accession | YP_001182462 |
Protein GI | 146292038 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAGTCG TCGCACTCAA CCATGAAATC TGCGATAATC TGCGCCTTAA ATTTATTGGC GCAGTGTGGC ACATGACAAC ACAATTTTCA GTAGCGGGTG TTGAACTCGA ACTCTTACGG TATCCAGCTC AGCAGGAATC CAATCTTCAA GCTTGGGATG CCGCCGATGA ACACTTACTC AAAAGCCTTA TTGAGTCAGA GCAAGCCGCC GTGCCAACCG CTATTGTCAA CGACAGTTTC GGCGCCTTAA GCTGCGGTTT ATCTAAATTG CATCCAAGTT GGCCACTATT TGTTGAAACC GATGCTAGAA CCAGCTTTTT AGGCACAGAG CAAAATCATG GCCGCAATCA GTTGCCGATG GATAATCTGC AGAGGTTTAC CAGCCGCGAT ACCTTGCCGG AAAACTTAGC CTTAGTATTG ATGAAGTTGC CTAAGAACTT AAGCTACTTT GCCCACCAGC TAACGCGCCT GTCGCAAGTG TTACCTGCAG GCACTCGTGT ATTAGTGGCC GCCAAAGCCA AATCGATCAA TAGCGCCTTA CTCGACATCT TTGCTAAACA TTTAGGCCCC GCAAGCGCCA GTTTAGCGTG GAAAAACACG CGAGTGATCA CCTGTGTCAG CGATGGCAAA CCAAGACCAT TAGCCAAAGA AGTGACTTGG GCCGTACCCG AATATCAACT TGAGATCAGC AATTTAAGTA ATGTGTTTGC CGCCAACAAA CTCGATATTG GCGCACGCAT CATGCTAGAG AATCTGCCCA AAGGGAATTT TAAGTCGATT GTTGATCTCG GCTGTGGCAA TGGCGTGCTG GGGTTACGCA CCGCCCAGTT ATCCCCAGAG GCTGACATCC ACTTTATCGA CGATTCTGAA ATGGCAGTCG CATCAGCCAA GGCAAACTGG GCACGCAACC AATTGCCCGC AGACAAAGGC CACTTTTATT GGGACGATTG CATGACGCAT CTGCCAGAAG AAGTTCAACC GGATCTGGTA CTGTGTAATC CGCCGTTCCA TCAAGGTGAA GCCATTACCG ATCATATTGC CTGGCAGATG TTTTTAGATG CCCGCCGCCG CTTAAAAGAG GGGGGGATCT TACATATCGT CGGCAACCGT CATCTGGCTT ACCATGTAAA ATTACAGCGC TTATTTAAGA ACTGCACCAC AGTCGCCTCC AACGGTAAAT TTGTGATCCT ACAGGCACAG AAAAAATAA
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Protein sequence | MRVVALNHEI CDNLRLKFIG AVWHMTTQFS VAGVELELLR YPAQQESNLQ AWDAADEHLL KSLIESEQAA VPTAIVNDSF GALSCGLSKL HPSWPLFVET DARTSFLGTE QNHGRNQLPM DNLQRFTSRD TLPENLALVL MKLPKNLSYF AHQLTRLSQV LPAGTRVLVA AKAKSINSAL LDIFAKHLGP ASASLAWKNT RVITCVSDGK PRPLAKEVTW AVPEYQLEIS NLSNVFAANK LDIGARIMLE NLPKGNFKSI VDLGCGNGVL GLRTAQLSPE ADIHFIDDSE MAVASAKANW ARNQLPADKG HFYWDDCMTH LPEEVQPDLV LCNPPFHQGE AITDHIAWQM FLDARRRLKE GGILHIVGNR HLAYHVKLQR LFKNCTTVAS NGKFVILQAQ KK
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