| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0880 |
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| Symbol | |
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| ID | 5081891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 976845 |
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| End bp | 977588 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498005 |
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| Product | transcriptional regulator, CadC |
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| Protein accession | YP_001182408 |
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| Protein GI | 146291984 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.102623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTGG GGGGCTGCTG GTTTGATCGT GAGCGGGGTT TGCTTATCGA GCAGTCCAGA
GATGAGTCAT GGCATCTTCC TCGAGCTGAA CTGCAGGTGC TAAGTTTACT TGTGGAACAT
CAAGGGAAAC TGGTCTCTAA GCATATGCTG AAAACGGGTG ATGGTGCTCA CCCGCCGTTA
ACTGACACGT CTGTTGCAAG GGCCGTGTTT ATGCTCCGTT CCTTTTTGGG GCCTCAGTAC
GAAAGTTTGA TTGAAACCGT TAAGGGCCAA GGCTACTTAC TGCACAGTCC CCATGGCCAA
TTACCTAGGC AATTTCATCA GAAAGGATTG CAATCCATTT CTTGGTGGGG AGTGTCATTA
CTTTTTGGTT TAATGTTAGC GCTCTCTCTT TTTTATATCA GTCACATTGA TCGGACCATA
CCGACAGAGC CTTTAATGTC AACTGAACTT CCCCTTGAAT CAGGTCAACA TATTCGTTTG
TATTTATATG CCAATTCAAA AACCAACAAT ACGTTATTAT TCGAGTTAGG CGAGCGTTTA
GGGCAGGGAC TTACCGCTTG TAAACGCAGC GATTGGGCCG ATGTTTATAC CTCGCTGTCC
CATGATAAGC AATTGTTTTA TATAACCCTA CGAGGACATA AACTGGGACA GTCTGTTATC
CGTAATATCA AGATCGCGGA TCTCAGAAGA CCTAAAGAGT TTATTGATGC TCAGTGGCTG
CAGGAGGTTG GGATCTGTGG CTAA
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| Protein sequence | MQLGGCWFDR ERGLLIEQSR DESWHLPRAE LQVLSLLVEH QGKLVSKHML KTGDGAHPPL
TDTSVARAVF MLRSFLGPQY ESLIETVKGQ GYLLHSPHGQ LPRQFHQKGL QSISWWGVSL
LFGLMLALSL FYISHIDRTI PTEPLMSTEL PLESGQHIRL YLYANSKTNN TLLFELGERL
GQGLTACKRS DWADVYTSLS HDKQLFYITL RGHKLGQSVI RNIKIADLRR PKEFIDAQWL
QEVGICG
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