| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0847 |
|---|
| Symbol | |
|---|
| ID | 5081958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 939242 |
|---|
| End bp | 940015 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640497972 |
|---|
| Product | MltA-interacting MipA family protein |
|---|
| Protein accession | YP_001182375 |
|---|
| Protein GI | 146291951 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3713] Outer membrane protein V |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0974591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TTTGCTTTGT AATCACAACC ATTTTGATGT CAAGCCATGC CCTTGCTGAA
GGCAATACCT ACATACGCAA CGGTAATATT TATAGCCATC AGGATCAGTT TTTTGCGGGT
GCCGGAGTTG CAACAGGCAG TAAGTTCTAT AAGGGTCAAG ATCACCAAAC TGGTGCCTAC
CTCAATGGCG GCTACCACGG TGAAGACTTT AACGCCGATC TGTCCGGCAT CAACTACCGT
TTTTTAGGCA ATAACGATAG TACCGTCAAT TTCAGCGTTT TTATGGTCGC GAATCCCGGC
TTTGATGCCG ATGATGCCGA TATTTTAACG GGCATGAAGG ATCGCAAATT CAGTGGTGAT
TTGGGGTTAA ACGCCGACAT TCATTTAGGA AATGGCACGC TATCATCCAA ATTCCAACAC
GATGTAACGG GTGTCTATAA TGGTTTTCAG GCTGATATCA CCTATTACCA TCCAATCAAT
GTTGGCTTCG GGGATCTGGT GCCTTATGCG GGTGTGCACT ATTTCAGTAA AGATTTTGCA
AACTACTACA CAGGTGTGAC GTCATCTGAA GCAACGGCGT TTCGCCCTGC CTATCAAGCC
GACGGTACCT TTGCATATAA GCTAGGTTAC GCTTTGGTTA TCCCAGTCAC TAAACATTTA
GATATCACTC AAAACACTGG TTACTCGCAC ATAGGTGCCA ATATGGCTGA CTCTCCGCTA
ATAGACAGTA ACAACCAGTG GGTTACCACC CTTGGCGTGA CCTATAGCTT CTAA
|
|---|
| Protein sequence | MKKLCFVITT ILMSSHALAE GNTYIRNGNI YSHQDQFFAG AGVATGSKFY KGQDHQTGAY
LNGGYHGEDF NADLSGINYR FLGNNDSTVN FSVFMVANPG FDADDADILT GMKDRKFSGD
LGLNADIHLG NGTLSSKFQH DVTGVYNGFQ ADITYYHPIN VGFGDLVPYA GVHYFSKDFA
NYYTGVTSSE ATAFRPAYQA DGTFAYKLGY ALVIPVTKHL DITQNTGYSH IGANMADSPL
IDSNNQWVTT LGVTYSF
|
|---|
| |