| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0792 |
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| Symbol | |
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| ID | 5082002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 883169 |
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| End bp | 883858 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640497918 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001182321 |
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| Protein GI | 146291897 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.305614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTTTAG ACAAATTTAT TTGTGAAAGT ACCTCTCTCA CCCGTTCATT GGCCAAAAAA
GCGTTGCACC GCGGTGATAT CACCTGTGAT GGCGTGGTTA TTAAAGACGC TGGTTTTAAA
GTCACTGAGG GAATGCAGAT TTGCCTTGAG GGAGAACCCA TTGTTTTAGT GGGTGAGCGT
TATGTGATGC TCAATAAACC CGTTGATACG ATTTGTTCAA CCATCGATGA GGCTTATCCA
TCAGTGTTAA GTCTGCTCGA TATCCCGAAG CCTGAAACCT TGCATATTGC CGGTCGTTTA
GATGCTGATA CGACGGGACT TGTGTTGATC ACCAGCGATG GTCAGTGGTC ACACAAAATC
ACATCGCCTA AAAAAGAATG CGGTAAGCGT TACTTAGTGC AACTAGCCGA CCCTGTGGAT
GACGGCCTAA TTGAGGTCTT TGCGAAAGGG GTTGCACTGC GTAATGAAGA TGGTCTGACA
AAACCTGCGG TCTTAGAGAT TATTGATCCG CAACAGGTTC GTTTAACCAT TACCGAGGGG
AAATATCACC AAGTGAAGCG TATGTTCGCC GCTGTTGGTA ACCTTGTGGT GGGATTGCAC
CGTGAACGTA TTGGGCAAAT TGAGTTAGAT CCAGATTTAG CCCTAGGTGA GTGGCGTTAC
TTAACCGCTG AAGAGATCGC TTCAATCTGA
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| Protein sequence | MRLDKFICES TSLTRSLAKK ALHRGDITCD GVVIKDAGFK VTEGMQICLE GEPIVLVGER
YVMLNKPVDT ICSTIDEAYP SVLSLLDIPK PETLHIAGRL DADTTGLVLI TSDGQWSHKI
TSPKKECGKR YLVQLADPVD DGLIEVFAKG VALRNEDGLT KPAVLEIIDP QQVRLTITEG
KYHQVKRMFA AVGNLVVGLH RERIGQIELD PDLALGEWRY LTAEEIASI
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