| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0760 |
|---|
| Symbol | |
|---|
| ID | 5081969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 848178 |
|---|
| End bp | 848642 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640497885 |
|---|
| Product | putative chemotaxis protein CheX |
|---|
| Protein accession | YP_001182289 |
|---|
| Protein GI | 146291865 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1406] Predicted inhibitor of MCP methylation, homolog of CheC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000652399 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTCA ATTTTATTAA CCCTTTCCTA CAATCGCTAC TCAATGTTAT TTCAACAATG
GCGAGTATGG ATTTGACGCC GGGCAAGCCC CAAATAAAAA ATGATAACTT AGCCAAAGGA
GATGTTTCCG GATTGATCGG TATGGTTGGG CCACAGACTA AAGGATCTTT GTCGATTACA
TTTGAGCAAA CGCTTGTACT ACAGATCATG CAGAATATGC TCGGTGAGAA CCCTGGCAAA
ATTAATGAGG AAGTCACCGA TTTGGTCGGT GAAATCACCA ATATGGTCAC AGGTGGCGCT
AAAAATCTTT TAGGGCAAAA AGGATATGAA TTTGAAATGG CTACGCCTAT GGTCGTATCA
GGAAAAGGCC ATACAATTTC CCATAAAGCC AATGGCACCA AAATTATTAT GCCTTTTACT
AGCCCACATG GTACTGCTTT TATTGAAATC TGTTTTGAAA GCTAA
|
|---|
| Protein sequence | MNVNFINPFL QSLLNVISTM ASMDLTPGKP QIKNDNLAKG DVSGLIGMVG PQTKGSLSIT
FEQTLVLQIM QNMLGENPGK INEEVTDLVG EITNMVTGGA KNLLGQKGYE FEMATPMVVS
GKGHTISHKA NGTKIIMPFT SPHGTAFIEI CFES
|
|---|
| |