Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0743 |
Symbol | |
ID | 5082051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 830834 |
End bp | 831946 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640497868 |
Product | AFG1 family ATPase |
Protein accession | YP_001182272 |
Protein GI | 146291848 |
COG category | [R] General function prediction only |
COG ID | [COG1485] Predicted ATPase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000113229 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCCAGT TAAGCCCTTG GCAGCATTAT CAAAAAGATC TTACCCGTGA CGGTTTTTCC CATGATCCAG CCCAAGAAGT GGCGGTTAAA GCATTACAAC GTGTATATGA GGACTTAACC ACAGCCGAAA TACCTCATTC TATCGTCGGT AAATTGTTTA CGGCTTTAGG GTTAAAATCC GCTCCTGAAG GTATAAAAGG ACTCTATCTT TGGGGCGGTG TTGGTCGTGG TAAAACCTAT TTGATGGACA CGTTTTTTGA TGCATTGCCT GGTGATAAAA AACTGCGCGC TCACTTCCAT CGTTTTATGC ACCAGTTGCA TTTAGAGTTG GATAAGCTAA AGGGCGTTCG CGATCCATTG ATTGTGATTG CCAAACAGAT GGCCGCTAAA TATCGAGTGA TTTGTTTTGA CGAGTTTTTT GTTTCCGATA TTACTGACGC TATGTTACTA GGTACGTTAT TCCAAGCTTT ATTTAAAGAA GGAGTGGTAT TAGTTGCGAC CTCAAATATT ATTCCCGACG ATCTCTACAA AAATGGTTTA CAGCGTGCGC GTTTCTTGCC GGCAATAGCT TTGATCAATC AACATTGCGA AGTGCTTAAT GTGGATTCTG GGATTGACTA TCGTTTACGC ACCTTAGAGC AAGCGGAAAT TTATCATTAC CCGCTAGATG CACAGGCAGA TAAAAATTTA CTGCATTACT TTTCTCAATT AGCGCCTGAG GCAGTGGTAT CCACTGAAGC CATTGAAATT GAAGGGCGTG TGATACCGAT TCGTCAACAA GCACAGAGTG TGTTATTAAT TGATTTCAGG GCTCTTTGTG ATGGACCTCG TAGTCAACGT GATTATATGG AATTGGCTCG GATTTATCAT ACCGTGCTGG TCAGCGGCAT AGAACAAATG GGGGCATTTT TAACAGGTGA CGATATCGCA AGGCGTTTTT TAGCGATGGT GGATGAGTTT TACGAGCGTA ATGTAAAGCT TATTGTGTCA GCCCAAGTCC CGCTTGAAGA TATCTATGCC GATGGTTTGC TTAACTTTGA ATTTAGGCGT TGTCGCTCGC GTCTTATTGA GATGCAATCC CACGATTATT TGAAATCGGA ACATCTTCCC TAG
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Protein sequence | MPQLSPWQHY QKDLTRDGFS HDPAQEVAVK ALQRVYEDLT TAEIPHSIVG KLFTALGLKS APEGIKGLYL WGGVGRGKTY LMDTFFDALP GDKKLRAHFH RFMHQLHLEL DKLKGVRDPL IVIAKQMAAK YRVICFDEFF VSDITDAMLL GTLFQALFKE GVVLVATSNI IPDDLYKNGL QRARFLPAIA LINQHCEVLN VDSGIDYRLR TLEQAEIYHY PLDAQADKNL LHYFSQLAPE AVVSTEAIEI EGRVIPIRQQ AQSVLLIDFR ALCDGPRSQR DYMELARIYH TVLVSGIEQM GAFLTGDDIA RRFLAMVDEF YERNVKLIVS AQVPLEDIYA DGLLNFEFRR CRSRLIEMQS HDYLKSEHLP
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