| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0717 |
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| Symbol | |
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| ID | 5082025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 806821 |
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| End bp | 807375 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640497842 |
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| Product | OstA family protein |
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| Protein accession | YP_001182246 |
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| Protein GI | 146291822 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.184609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCAAA ATAAGATATT ACTTGCCAGC TTAATGCTAA TAATGAGCAT GAGCGCTTAT
GCAAAAGTCG CAGATCTGCA GCAAGAAGTT AAAATTAAAG CCGTTAGCCA GACCGCAGAT
ATCAAAAACA ACCAAATCAT CTTCTTTGGC CCAGTAGAAG TCACACAGGG TTCAATCAAA
ATCCAAGCGG CCCAGCTTCG CGCCTTTTCT GCCGATGGTG AAACCAGCAA AATCTTAGTT
GCAACGGGCA ACCCCGCGAC TTACACCCAA ATATTAGATG ACGGTCGCCC TGCTTCCGCC
AGTGCTAAAG AAATTCGCTA TGAAATGGCG ACAAGAACAT TAACACTGAC AGGTTCGGCC
TCCCTCGATC AAGCGGGCAG TCAAGTGACA GGTAACCTCA TTCGTTACAA CATCATTCAA
CAAAAACTGA TCGCAGAAAG CACAGGGAGT GGTGATGATC GCGTGATCAC TATCATCCAA
CCTGAAAACT ATCAGGATGA TCTCAAAACC CAAACACCCG CAGATAAACC TGTGAAAGAG
CAGGATTCTC AATGA
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| Protein sequence | MKQNKILLAS LMLIMSMSAY AKVADLQQEV KIKAVSQTAD IKNNQIIFFG PVEVTQGSIK
IQAAQLRAFS ADGETSKILV ATGNPATYTQ ILDDGRPASA SAKEIRYEMA TRTLTLTGSA
SLDQAGSQVT GNLIRYNIIQ QKLIAESTGS GDDRVITIIQ PENYQDDLKT QTPADKPVKE
QDSQ
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