| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0697 |
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| Symbol | |
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| ID | 5082105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 785374 |
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| End bp | 786453 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640497822 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001182226 |
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| Protein GI | 146291802 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCAT ATCGACTCCT CCCCTTAGCG GCGCTGCTTC CAGCCTTGCT CAGTGGTTGT
TCACCTGCCG AGAGTTCAGT GCAAACTCCA GCGGTTCGTC CAGTAAAACT GTTTGAGGTG
ATACAACTCG AAGGCGGGGA TTTTAGAACC TTCCCAGCCC GCGTAGCAGC CAATAGCCGT
GCCGAGTTAT CGTTTCGTAT TTCAGGACAA TTGACTGAAC TTGCATTAGT TGAAGGACAA
AAAGTCACAG AGGGAAGCTT GCTTGCCAAA CTGGACGACA GGGATGCACA TAACAACTTG
ATGACGCGTG AAGCCGACCA TGAACTTTTG GCTGCGGATT ATCAACGTAA AGTAGAGTTA
TTGAATCGCA AACTGATTTC ACAAGCCGAA TTCGATAGCA CCCAAGCTCA GCTAAAATCC
GCCAAGGCCG CTTTGGCAGC CGCGCGCGAT CAACTGAGTT ATACCCGTTT AACCGCCCCT
TTTAGTGGCA CTATCGCTAA GCGCTTAGTG GATAACCACC AAATAGTGCA GGCAAACCAA
GGGGTGTTAA CACTGCAAAA TAATAACTTG CTCGATGTCA GCATCCACGT GCCCGAAGCG
ATGGCCGCAG GCTTAAACGA GTATATTAAG CAGAAAAACT TTACCGCAAA GGTGCGATTC
ACCGCGCTAG AAGGAATGGA GTTTGATGCT AAATTCAAAG AGTACTCAAC CCAAGTTACG
CCGGGTACTC AAGCCTATGA AGTGGTGTTT TCGCTCCCAC AACCTAGCAA TGTGCAGCTA
TTGCCAGGAA TGAGTGCCGA GCTAACCTTA GCCTTGGTTA AAGCTCCTAA TCAAATTTCA
GCTATTGTAC CTGTTACCGC TATCGATAAA CGTGACCAAG ACGGTCAAGT ACAGGTCTGG
GTATATCAAA CTCAATCAGG CGAAGTCGTC CCCGCACCAG TGACACTGGG ACGCGTAACC
AATCAAGGGA TTGAAATTCT TGGTGGTCTA AATAAAGGCG ATCTTATTGT CAGTGCGGGC
GTGTCTCAGT TATCCACGGG GATGAAAGTT AAACCACTGC GCTGGCAGCG TGGAGTATAA
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| Protein sequence | MTSYRLLPLA ALLPALLSGC SPAESSVQTP AVRPVKLFEV IQLEGGDFRT FPARVAANSR
AELSFRISGQ LTELALVEGQ KVTEGSLLAK LDDRDAHNNL MTREADHELL AADYQRKVEL
LNRKLISQAE FDSTQAQLKS AKAALAAARD QLSYTRLTAP FSGTIAKRLV DNHQIVQANQ
GVLTLQNNNL LDVSIHVPEA MAAGLNEYIK QKNFTAKVRF TALEGMEFDA KFKEYSTQVT
PGTQAYEVVF SLPQPSNVQL LPGMSAELTL ALVKAPNQIS AIVPVTAIDK RDQDGQVQVW
VYQTQSGEVV PAPVTLGRVT NQGIEILGGL NKGDLIVSAG VSQLSTGMKV KPLRWQRGV
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