| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0696 |
|---|
| Symbol | |
|---|
| ID | 5082104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 782287 |
|---|
| End bp | 785370 |
|---|
| Gene Length | 3084 bp |
|---|
| Protein Length | 1027 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640497821 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_001182225 |
|---|
| Protein GI | 146291801 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.627027 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTG CTGAATACTC CATTCGCCAC AAAGTCATTA GCTGGATGTT TGTGTTACTC
CTATTAATTG GTGGTGGCAT CAGCTTTACG GGATTAGGGC AGTTAGAATT TCCCGAATTT
ACCATCAAAG AAGCCCTAGT GATCACGGCT TATCCCGGTG CCTCGCCAGA ACAAGTTGAA
GAAGAAGTTA CCCTACCGCT GGAAGATGCC CTACAACAAC TCGATGCAGT CAAGCATGTG
ACCTCTATTA ACAGTGCGGG TTTGTCACAA ATCCAAATTG AGATCAAAGA CAGTTACGAT
AAAACTAGCC TGCCACAGGT ATGGGATGAA GTGCGCCGTA AGGTCAATGA TACTGCGGGC
CAATTACCTC CAGGCACAGG GACCCCACAA GTCATGGATG ACTTTGGCGA TGTATACGGG
ATTTTATTTA ATCTTTCAGG GCCAGATTAC AGCAACCGAG AACTGAGCAA TTACGCCGAC
TATTTACGCC GTGAGTTAGT ACTCGTGCCA GGGGTAAAAA AAGTTTCAGT TGTGGGCAGT
ATTACCGAGC AAGTGGTCAT TGAAATATCT CAGCAAAAAC TCTCGGCGCT AGGGTTAGAT
CAAAGCTATA TCTATGGCCT TATCAATAAT CAAAACGTGG TCTCCAATGC AGGAAGCCTA
GTGATTGGTG ATAATCGAAT CCGCATTCAT CCCACTGGTG AATTTGGCAG TATTCAGGAT
CTCGCACGCT TGATTGTCAG TCCACCCGGC AGCACGGAAC TTATCTATTT AGGCGATATT
GCCAATATCG CAAAGGATTA TAACGAAACC CCGACAGTGC TTTACCACAA CAAAGGCGAA
GCTGCGCTAT CCCTAGGCAT TTCCTTTTCT AGCGGTGTAA ACGTCGTCGA AGTCGGTCAA
AGGGTGAGTG AGCGCCTCGC CGAACTCGAA TCCCAACGTC CGATTGGAAT GAATTTAGAT
ACAGTCTACA ACCAAAGTTC GGCGGTAGAT GACACCGTTA ATGGCTTTTT AATCAATCTA
TTAGAGTCAA TTGCCATCGT TATTGCCGTA CTGTTGCTGT TTATGGGCTT ACGTTCAGGC
TTATTAATGG GGCTTATCCT GCTGTTAACC ATCTTAGGGA CTTTCATCGT AATGAAAGTG
CTAGGTATTG AGCTACAGCT CATTTCACTC GGTGCGTTGA TTATCGCCTT AGGTATGTTG
GTCGATAACG CGATTGTTGT CACCGAAGGA ATTTTAATTG GCCTTCGCCG TGGCAAGACG
CGCTTAGAAG CGGCAAAACA AATTGTCTCC CAGACTCAAT GGCCACTGTT AGGTGCAACC
ATTATTGCCA TCATCGCCTT TGCGCCTATC GGATTATCGC AAAATGCCTC AGGAGAATTT
TGTCGCTCAC TGTTCCAAGT GCTGATGATT TCATTATCTA TCAGTTGGAT CACCGCAATT
ACCCTCACCC CTTTCTTCTG TCATTTGTTG TTTAAAGATG CACCAAGTGA TGATGAGCAA
GATCCTTATA AGGGTTGGGT TTTCAACTTA TATCGAGCCA GTTTAACCCT AGCGCTGCGA
TTTAGAATTG TGAGCATACT GCTGGTTGGT GTGCTGTTAG TGAGTGCCGT GATTGGCTTT
GGTCATATTA AAAATGTGTT TTTTCCCGCA TCCAATACGC CAATCTTTTT TGTGGATATT
TGGATGCCTG AAGGCACTGA TATTAAAGCA ACGGAGCGCT TTGCTGCTGA TATTGAACAA
CAATTACTCA AACAAGCTGA GCAACAGCAT ACTGGCCTGA CCCACCTAAC GACAGTAATA
GGCCAAGGGG CGCAGCGTTT TATTCTGCCT TATCAGCCCG AAAAAGGTTA CCCTGCATTC
GCCCAGTTGA TTGTAGAAAT GCAGGATCTT GAGGCGGTGA AAAACTATAT GCCGGAACTG
GAGCGTTTTT TAAATCAACG CTTCCCACAG GCACAATATC GCCTAAAAAA TATGGAAAAT
GGTCCATCCC CCGCAGCCAA AATTGAGGCT CGTTTCTATG GTGATGATCC TGAAGTCCTA
AGAGCATTAG GTGCCCAAGT CGAAGCTATT TTCTACGCGG AGCCAAGCAT GGATGGTATA
CGCCACGACT GGCGTAACCA AGTCCCGTTA GTTCGTCCGC AATTGGAAAA TGCCCAAGCA
CGGGAAACGG GGATCAGTAA ACAAGATCTC GACAATGCAC TGCTGGTTAA CTTTAGCGGT
AAACAAATTG GTTTATATCG AGAAACCAGC CACTTGTTGC CGATAGTCGC AAGAGCACCC
GCCGAGGAGC GCTTGCAAGC TGATAGTCTC TGGAAACTAC AAATTTGGAG TAGTGAACAC
AGCACCTTTG TACCAGCAAC CCAAGTTGTC AGTAACTTCA ATACCGAATG GGAAAATCCA
CTGGTGATGC GCCGTGACCG TATGCGCATG CTTGCTGTCT TGGCAGATCC TAAATTAGGC
AGCGATGAAA CGGCGGACTC TGTGCTACGT AAGGTCAAAG ATAAGGTTGA AGCTATCGCC
TTACCTGCTG GCTACCACCT CGAATGGGGC GGCGAATATG AAACCGCAGG TGAAGCGCAA
ACAGCGGTGT TTAGCTCAAT TCCGCTGGGT TACCTTGCCA TGTTTTTAAT TACAGTATTC
CTATTCAACT CTGTACGTCA GCCATTGGTC ATTTGGTTTA CTGTACCACT CGCATTGATT
GGGGTTTCGG CGGGACTCTT GTTATTCGAT GCGCCCTTCA GCTTTATGGC ACTGCTTGGC
CTATTGAGCT TATCGGGCAT GGTGATCAAA AACGGCATTG TGTTGGTCGA TCAAATCAAC
CTTGAACTAA GTGAAGGTAA AGCGGCCTAT AGTGCATTGT TGGATTCCTG CGTCAGCCGT
GTTCGCCCTG TCATGATGGC GGCGATAACC ACAATGCTTG GAATGATCCC CTTAATTTCA
GATGCATTTT TTGGTTCGAT GGCCATAACC ATTATCTTTG GCTTAGGCTT CGCTTCTGTG
CTGACATTAA TTGTCCTGCC AGTCATGTAT AGCTTGGCCT TTAATATCAA ACCGACACTA
ATAGGAGGTC AATCACGTAA CTAA
|
|---|
| Protein sequence | MNIAEYSIRH KVISWMFVLL LLIGGGISFT GLGQLEFPEF TIKEALVITA YPGASPEQVE
EEVTLPLEDA LQQLDAVKHV TSINSAGLSQ IQIEIKDSYD KTSLPQVWDE VRRKVNDTAG
QLPPGTGTPQ VMDDFGDVYG ILFNLSGPDY SNRELSNYAD YLRRELVLVP GVKKVSVVGS
ITEQVVIEIS QQKLSALGLD QSYIYGLINN QNVVSNAGSL VIGDNRIRIH PTGEFGSIQD
LARLIVSPPG STELIYLGDI ANIAKDYNET PTVLYHNKGE AALSLGISFS SGVNVVEVGQ
RVSERLAELE SQRPIGMNLD TVYNQSSAVD DTVNGFLINL LESIAIVIAV LLLFMGLRSG
LLMGLILLLT ILGTFIVMKV LGIELQLISL GALIIALGML VDNAIVVTEG ILIGLRRGKT
RLEAAKQIVS QTQWPLLGAT IIAIIAFAPI GLSQNASGEF CRSLFQVLMI SLSISWITAI
TLTPFFCHLL FKDAPSDDEQ DPYKGWVFNL YRASLTLALR FRIVSILLVG VLLVSAVIGF
GHIKNVFFPA SNTPIFFVDI WMPEGTDIKA TERFAADIEQ QLLKQAEQQH TGLTHLTTVI
GQGAQRFILP YQPEKGYPAF AQLIVEMQDL EAVKNYMPEL ERFLNQRFPQ AQYRLKNMEN
GPSPAAKIEA RFYGDDPEVL RALGAQVEAI FYAEPSMDGI RHDWRNQVPL VRPQLENAQA
RETGISKQDL DNALLVNFSG KQIGLYRETS HLLPIVARAP AEERLQADSL WKLQIWSSEH
STFVPATQVV SNFNTEWENP LVMRRDRMRM LAVLADPKLG SDETADSVLR KVKDKVEAIA
LPAGYHLEWG GEYETAGEAQ TAVFSSIPLG YLAMFLITVF LFNSVRQPLV IWFTVPLALI
GVSAGLLLFD APFSFMALLG LLSLSGMVIK NGIVLVDQIN LELSEGKAAY SALLDSCVSR
VRPVMMAAIT TMLGMIPLIS DAFFGSMAIT IIFGLGFASV LTLIVLPVMY SLAFNIKPTL
IGGQSRN
|
|---|
| |