Gene Sputcn32_0694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0694 
Symbol 
ID5082102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp780581 
End bp781264 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content47% 
IMG OID640497819 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001182223 
Protein GI146291799 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTAT CCCTTTTACT CACCTTAGCC TTGATCCACG CGGTTGCTTT AGTCAGCCCA 
GGACCCGATT TTGCGATTAT GGTAAAAATT GCCACTCAGC AGTCAAGAAG CGCTGCCGTT 
GCTGCTGCGG TGGGAATTTC GGTGGCCATT GTCGCTCACA CTATTTTGAG TTTAACGGGC 
GTCAGTTTGG TTATTAAGAG TTCGCACACT TTATATTTGT TGGTGCAAAT CATTGGTGCC 
TGTTATTTAG CGTGGATGGG ATGGGGAGCT TTGCGCGCCG CTTTCGCGGT ATTGGCGACA 
CCGAAGGGAT CTCAAGGTGT TAACGATAGT GGCATGGCAG GATCGGCTGT AACGCCAGTG 
CCTTTGGGCA CAACGATGTC GCCTAAACAA GGCTTTTTAA CGGGGCTTTA TACGAATTTA 
TTGAACCCCA AAGCGTTAGT TTTTTTCTTA ACCTTGTTTT CTGCTTTGAT AACTCCCAGT 
GTGACTGTGA GCACTAAAGT TGCAGCCGCC ATGCTTCTCC TATTGCTATC ACTGCTGTGG 
TTTGGTTTTC TGGCACTAAT GCTGTCTAAG GCACAGGTGC AACGCAAACT ACAACGATTA 
ACACCGGTTA TTGATACTGT TATCGGCGTT ATTTTTATTG CGGTGGCATT CGCGATCGTC 
TCGAACTTGC TGTTTTCGGC CTAA
 
Protein sequence
MDLSLLLTLA LIHAVALVSP GPDFAIMVKI ATQQSRSAAV AAAVGISVAI VAHTILSLTG 
VSLVIKSSHT LYLLVQIIGA CYLAWMGWGA LRAAFAVLAT PKGSQGVNDS GMAGSAVTPV 
PLGTTMSPKQ GFLTGLYTNL LNPKALVFFL TLFSALITPS VTVSTKVAAA MLLLLLSLLW 
FGFLALMLSK AQVQRKLQRL TPVIDTVIGV IFIAVAFAIV SNLLFSA