Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0675 |
Symbol | |
ID | 5082083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 757789 |
End bp | 758778 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640497800 |
Product | NERD domain-containing protein |
Protein accession | YP_001182204 |
Protein GI | 146291780 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.160777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCTAA AAACTAAAAC ACTTCAAAAT ACTCAAACAC CACAAACCAT TGCGGGACAA AAACAAGAAC AGGATGTTGC CTTCTATTTA CGCCGCGCCT TCAAAGATCA TCCAGAAGTA TTGGTCATCA ATGATTTTCG ATTCACCTAT AACGACGAAA CCGCGCAAAT TGATCACTTA ATTATTTATC CCTATGGTTT TGTATTAATT GAATCCAAAA GCATAAAAGG CCATGTAGAT GTGAACCAAC AGGGTGAATG GACTCGCAGC CACGGAAGTA AATGGTTTGG TATGCCATCT CCTATCAAGC AAGTTGAACT ACAACAGTCA CTACTTAAAG AAATGCTAAA ACAGCATCGA AGTGAAATTC TCGGTAAGTT ACTCGGAATA AGACAGCAAG GCTTTGGCAT GCGTTGCTGG GATCATTTAT GCGCAGTATC AAGCGATGCG GTTATCAACA GAGATGCTAT GCCTACGGCT ATTTCGGCTC TATTAGTTAA AACTGAATTT TTAGTCGAGA AGCTTGAAAA GATCATGAAT CTTAAAAGTA AATTCATGCG CATTATAAAT GTAAGCGATA CCCGTCCCGA CTTTAATCAG CAAGAACTAA ACTCAATTGC TAAGTTCTTA ATCGATCGAC ATATAGATCA ACATCAGCCA ACAAGTGAAA TAACTCTCTT ACAGACACAA CAAATCAGAG AGCCTGTCGC ACACTTTGAC GTTAACAAAG TGGTTGAAGC TAAAACACCA ACAGTAACGC AATCTGCCAC ACACAGCATT CTTCGATGCA AACATTGCGG AGAATCAACA AACTACACAC CAATGTACGG TAAGTTTGGT TACTACATTA AATGCAATCA ATGCACTAAA AACACGCCAA TGAAACAAGC ATGCCCACAG TGCCAAAGTA AAAATATCAA AATACAAAAA CGCAGCCAGA GCTATACCCT CACCTGCCAA GATTGCAGCC ATAGCTCACA AGTGATTTAA
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Protein sequence | MILKTKTLQN TQTPQTIAGQ KQEQDVAFYL RRAFKDHPEV LVINDFRFTY NDETAQIDHL IIYPYGFVLI ESKSIKGHVD VNQQGEWTRS HGSKWFGMPS PIKQVELQQS LLKEMLKQHR SEILGKLLGI RQQGFGMRCW DHLCAVSSDA VINRDAMPTA ISALLVKTEF LVEKLEKIMN LKSKFMRIIN VSDTRPDFNQ QELNSIAKFL IDRHIDQHQP TSEITLLQTQ QIREPVAHFD VNKVVEAKTP TVTQSATHSI LRCKHCGEST NYTPMYGKFG YYIKCNQCTK NTPMKQACPQ CQSKNIKIQK RSQSYTLTCQ DCSHSSQVI
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