| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0655 |
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| Symbol | |
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| ID | 5080445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 728080 |
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| End bp | 730620 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640497780 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_001182184 |
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| Protein GI | 146291760 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACTTTG ATATCAGATC CTTGAACTCT CTACCCATTT ATTCTCTACT TGCTCCGCTG
CGTGAGGCAT TTTCTACCCA TGCCCAAGTC ATTCTTGAGG CGCCTACTGG GGCGGGTAAA
TCTACCGCTT TGCCTCTGGC TATGTTGGAT TGGCCTGAAG TCACTGGGCG TATTCTAATG
CTTGAGCCTC GTCGAGTCGC CGCCCGTAGT GTGGCACATT ATATTGCCCG CTGCCGACAA
CAGAACGTAG GGCAAGAGAT TGGGTATCGG GTGCGTGGAG AGTCTAAGGT CAGCGCCAAT
ACACGCTTAG AGATAGTTAC CGAAGGGATT TTAACGCGGA TGATCCAGCA AGATCCTGAG
TTAACAGGGA TTGAAGTGAT CATTTTTGAT GAGATCCACG AGCGGCATCT TACAACGGAT
CTTGGCCTTG CCTTAGCACT CGAAGTACAA ACTTCCTTGC GTGATGATTT AAAAATATTG
GCTATGTCGG CGACGTTATC TGGCTTAGCC TTAAGTGAAT TAATGCCCTC GGCGGCGATT
TTACACAGCG AAGGTCGCAG TTTCCCCGTT GAAGTTGAAT ATTGCCCCGT GCCAAGTCAG
CAGCATTGGT TGGAGCATCT TGGTCGCTGT ATTGTCGAGC TTGTCAGTGC AAATACGGTT
ACTGAAAAAA ATACCGTTCA CAATGATGTA TTAGTCTTTT TACCCGGCAA AGCTGAAATC
CTGCGATTAG TGCAGTATTT GGGTGAGCGT CTCGACAGTG ATACTTTCTT GATATGTCCA
TTATACGGTG AGCTTTCTGG TGCTGAGCAA GATCGCGCCA TAGCGGTATC GACACAGGGA
AAGCGTAAAA TTGTATTGGC AACCAACGTA GCAGAATCGA GCTTAACGAT TGATGGCATT
GGCTTTGTTA TAGACAGTGG CTATAAGCGT CAGGCGAGTT TTAATCCTAA AACCGGCGTT
ACTCGCCTCA GTTTAAAACG TATTAGTCAA GCCTCGGCAA CTCAACGTGC AGGGCGTGCG
GGGCGTTTAG CGGCAGGTCG ATGTATTCGA TTATGGAGTC AAGAAGAACA AGGGCGAATG
CTAAAGGCTG ATGAGCCTGA AATTTGCCAA GCAGATCTTG TCTCAATGGC CCACGATTGT
GCCTATTGGG GAGCAAAATC CTTTAGTGAT CTAATGTTAC TGACTTCACC CCCCAAGGTA
AATGAAGCAC TAGCTTGGCG GCTGTTACAG CATTTAGGGA TGGTTGATCC CCAAAATAAG
TTAACTCCCC ATGGCAAAGC TGCCTATGAG TTAGGTTGCC ACCCTCGGCT TGCCCATATG
TTACTGAGTG CTAAAACCTT AGCTGAGCAG TTATCTCAAC CAGAATTATC TAGCTTAGCC
TGTTTGCTTG CGGGGATTTT AGAGGCCAGA GGCTTACCCA AAAAGGGTGC AGATATGATG
AATTACCTGT ACTTTGCGAC TCAGGGACAA GTGGGGCAGC AGGTAAAACA ATGGCAAAGA
AAGTTAGCCG TGTCTGGTGA TTTAAGCGTG ATAGCCTCCC ATGCTCATCA TAAAGATGTC
GGGTTATTAT TGGCATTTGC CTATCCTGAT CGTATCGCGA GGGCGCGGGG CGTAGAGGGA
TATCAATTGG CTAATGGCAC GGGTGTTGTG CTCGCCGCGG AGGATGGACT TGCGCAAACA
CCATGGCTTG TTGTCGCTGA TTTTCAAGAA ACAGAAGGTA AAAGTGCAGG TCGGATCTAT
TTGGCAAGTC AGTTGCACTC CAATCTATTC GATGAGGCAC TAAAGCCCCT GCTAAATATC
ACAGAGCAAT GCGGTTGGGA TGAGATAAAA GGGCGAGTAG TGGCAGAACG CCAATATAAG
ATTGGCCAAA TATTGTTCAG GTCTGAATCA ATATCTAAGC CTGAACGCCC ACAAATAGTG
GCCGCATTAC TGAACTATAT CCGTTTGCAG GGATTAAAAA TTCTCAATTG GAACGACAAC
TTAGAACAAC TCCAATATCG ACTCCAGTTG GCTAAAGCAC TGGATGCGAG TACTGATTGG
CCTGATATCA GTGACACTGC ATTATTGGCA AACCTTGAAA CTTGGCTGGC GCCTTACCTT
GAAAATGTGA ATAATCTGCC GCAGTTACAG AAACTCGATT GTTTTAGCTT TGTCGCAAAC
CAATTAAGTT GGCAGCAGCA ACAAATGCTC GAGACATGTT TGCCAACCTC TTGGGCGTTA
GTCACTGGAA CGCATGCCCC GATAGTGTAT GACGCCTCTG GGCGAGCTTT GCTTAGGGTA
AGATTACAAG AAACCTTTGG TATGGCACAA AGCCCAATAT TGGCACAGGG CAAACTTAAG
GTGACGATGG AGTTGCTCTC GCCAGCACAG AGACCATTAG CACTTACAGC CGATTTAGCC
AGCTTTTGGC AGGGCCCTTA TGTTGAAGTC AAAAAAGAAA TGCGTGGTCG TTATCCAAAA
CATTTGTGGC CGGACGATCC TGTGAATACT TTACCTACAA AATATACCAA GAAGAAAACC
TTGGGTTTAT CTCAGTCATA G
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| Protein sequence | MNFDIRSLNS LPIYSLLAPL REAFSTHAQV ILEAPTGAGK STALPLAMLD WPEVTGRILM
LEPRRVAARS VAHYIARCRQ QNVGQEIGYR VRGESKVSAN TRLEIVTEGI LTRMIQQDPE
LTGIEVIIFD EIHERHLTTD LGLALALEVQ TSLRDDLKIL AMSATLSGLA LSELMPSAAI
LHSEGRSFPV EVEYCPVPSQ QHWLEHLGRC IVELVSANTV TEKNTVHNDV LVFLPGKAEI
LRLVQYLGER LDSDTFLICP LYGELSGAEQ DRAIAVSTQG KRKIVLATNV AESSLTIDGI
GFVIDSGYKR QASFNPKTGV TRLSLKRISQ ASATQRAGRA GRLAAGRCIR LWSQEEQGRM
LKADEPEICQ ADLVSMAHDC AYWGAKSFSD LMLLTSPPKV NEALAWRLLQ HLGMVDPQNK
LTPHGKAAYE LGCHPRLAHM LLSAKTLAEQ LSQPELSSLA CLLAGILEAR GLPKKGADMM
NYLYFATQGQ VGQQVKQWQR KLAVSGDLSV IASHAHHKDV GLLLAFAYPD RIARARGVEG
YQLANGTGVV LAAEDGLAQT PWLVVADFQE TEGKSAGRIY LASQLHSNLF DEALKPLLNI
TEQCGWDEIK GRVVAERQYK IGQILFRSES ISKPERPQIV AALLNYIRLQ GLKILNWNDN
LEQLQYRLQL AKALDASTDW PDISDTALLA NLETWLAPYL ENVNNLPQLQ KLDCFSFVAN
QLSWQQQQML ETCLPTSWAL VTGTHAPIVY DASGRALLRV RLQETFGMAQ SPILAQGKLK
VTMELLSPAQ RPLALTADLA SFWQGPYVEV KKEMRGRYPK HLWPDDPVNT LPTKYTKKKT
LGLSQS
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