| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0645 |
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| Symbol | argD |
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| ID | 5080435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 716371 |
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| End bp | 717588 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640497770 |
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| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
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| Protein accession | YP_001182174 |
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| Protein GI | 146291750 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTTG ATATGAAGTT AAACCGTGCC CAATTTGACG CAGTGATGGT GCCTAATTAT
GCGCCAGCGG CAGTGATCCC CGTTCGTGGC GAAGGAAGCC GAGTATGGGA TCAAGAAGGT
AACGAGTTTA TCGATTTTGC TGGCGGTATT GCGGTAAATT GCTTAGGTCA TTGTCATCCA
GCTCTCGTTA ATGCGCTAAA AACTCAAGGT GAAAAACTGT GGCATTTGTC CAATGTGATG
ACAAACGAAC CTGCCTTAGC CTTAGCGACT AAATTAGTGA ACAGCACCTT TGCCGACAAA
GTGTATTTTG CTAATTCAGG TGCTGAGGCA AACGAAGCCG CATTAAAATT AGCCCGTCGT
TATGCCTTAG AAAAATACGG TGTTGAAAAA GACGAAATCA TCGCATTCGA TAAAGCCTTC
CATGGTCGTA CTTTCTTTAC TGTAAGTGTT GGTGGGCAAG CCGCCTATTC CGATGGTTTT
GGTCCTAAAC CACAGAGCAT TACACATTTA CCTTATAACG ATATCGCAGC ATTAGAAGCC
GCTGTATCGG ATAAAACCTG TGCCATTATG CTTGAGCCAC TACAAGGTGA GGGCGGTATT
ATCAGTGGCG AGCCCGCCTT CCTCAAAGCG GTACGTGAAC TTGCGAATAA GCACAATGCC
CTCGTAATTT TTGATGAAGT CCAAACCGGT GTTGGCCGTA CTGGCGAGCT TTACGCTTAT
ATGGGAACGG ACATAGTGCC AGATATTCTC ACCACGGCTA AGGCTTTGGG TGGTGGTTTT
CCGATTGCTG CTATGCTGAC TACGGCTGAA ATTGCTGAGC ATTTAAAAGT GGGCACCCAT
GGTTCTACCT ATGGTGGCAA CCCATTGGCC TGTGCTATCG GTAATGCAGT ATTAGATGTT
GTGAACACGC AAGAAGTGCT AGATGGCGTG AAACATCGCG AGCAATTACT GCGTGATGGT
TTGAATAAAA TCAATGAAAA ATATCATGTT TTTTCAGAAG TTCGCGGTAA AGGTTTACTC
TTAGGGGCCG TTCTTAATGA ACAGTACCAA GGTCGTTCAC GCGACTTTTT GGTCGCCTCT
GTCGCCGAAG GCTTAATGAG TCTGATGGCG GGTGCTAACG TGGTGCGTTT TGCTCCTTCT
CTGGTGATCC CCGAGGCAGA TATTGCTGAA GGTCTAGCTC GTTTTGAACG TGCTGTGGCG
AGCATAGCTG CCGCCTAA
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| Protein sequence | MSVDMKLNRA QFDAVMVPNY APAAVIPVRG EGSRVWDQEG NEFIDFAGGI AVNCLGHCHP
ALVNALKTQG EKLWHLSNVM TNEPALALAT KLVNSTFADK VYFANSGAEA NEAALKLARR
YALEKYGVEK DEIIAFDKAF HGRTFFTVSV GGQAAYSDGF GPKPQSITHL PYNDIAALEA
AVSDKTCAIM LEPLQGEGGI ISGEPAFLKA VRELANKHNA LVIFDEVQTG VGRTGELYAY
MGTDIVPDIL TTAKALGGGF PIAAMLTTAE IAEHLKVGTH GSTYGGNPLA CAIGNAVLDV
VNTQEVLDGV KHREQLLRDG LNKINEKYHV FSEVRGKGLL LGAVLNEQYQ GRSRDFLVAS
VAEGLMSLMA GANVVRFAPS LVIPEADIAE GLARFERAVA SIAAA
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