| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0638 |
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| Symbol | |
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| ID | 5080428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 704965 |
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| End bp | 707841 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640497763 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_001182167 |
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| Protein GI | 146291743 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00172923 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAGA TTGAAATACG CGGCGCCCGC ACCCACAATC TCAAAAATAT CAACCTGACT
ATCCCAAGGG ATAAACTGAT TGTCATCACA GGTTTATCTG GGTCCGGCAA ATCCTCCCTT
GCATTTGATA CTTTATATGC CGAAGGCCAA CGACGTTACG TTGAGTCCCT ATCAGCCTAC
GCTCGTCAGT TCTTAAGTTT GATGGAAAAA CCCGATGTAG ACCATATTGA AGGTTTAAGC
CCAGCCATCT CTATCGAGCA AAAATCGACA TCCCATAACC CGCGCTCTAC GGTGGGGACC
ATTACCGAGA TTTACGATTA CCTACGTCTA CTATTTGCTC GTGTAGGCGA GCCACGCTGT
CCAACGCATA ATCAACCTTT GGCAGCGCAA ACCGTCAGTC AGATGGTCGA TAAAGTCTTG
GAAATGCCCC AAGATAGCCG CTTAATGCTA TTAGCCCCTG TGGTCAACGC CCGTAAGGGT
GAACACGTTA AACTGCTGGA AGGCTTAGCC GCTCAGGGAT ATATCCGTGC CCGTATCGAC
GGTGAAGTAT GCGATTTAAC CGATCCACCA ACACTGGATT TACACGTAAA ACACACCATT
GAAGTGGTCG TTGACCGTTT TAAAGTACGT GACGATATCC AGCAACGCTT AGCTGAGTCC
TTTGAAACTG CGCTAGAACT CTCCGGCGGC ATTGCCATCG TTGCCAGCAT GAATGAAGGT
GACGGTAAGA CCAAGAGTGA CGAGCTCATC TTTTCCGCTA ACTTTGCCTG CCCGCATTGC
GGTTATTCAA TGGCAGAATT AGAGCCACGG ATTTTCTCCT TTAATAATCC TGCGGGGGCG
TGCCCAACCT GTGACGGTTT AGGCGTGCAG CAATTTTTCG ACCCAGAGCG CGTGATCACT
AATACCGAGC TTTCACTGGC GGGCGGTGCG ATTCGTGGCT GGGATAGACG CAACTTCTAT
TATTTCCAAA TGCTCAGTTC ACTTGCCGAG CATTATAAGT TTGATGTGGA AGCCCCCTTC
GAACAACTGA GTGAAAAAGT CCGCAAAATC GTACTCTATG GTTCAGGCAA AGAAAGCATT
GCCTTTAAAT ACATTAATGA CCGTGGCGAT GTAGTGGTGC GTAATCACCC CTTCGAAGGC
ATTCTAAACA ATATGGACAG GCGCTATCGC GAAACCGAAA GTAACTCGGT ACGTGATGAA
TTAGCCAAGT TTATCAATAC TCAAGCCTGT CAAAGCTGTG GTGGCTCGCG TCTACGTGAA
GAGGCCCGTC ATGTGTTTAT TGGCGATCTC AACCTACCCA AACTCACCAC TTGGTCAATT
GGTGAAGCCT TGGACTACTT CGAGAAAGTC GAATTTAGCG GCCAAAAGGC GCAGATTGCC
GAGAAGATTT TAAAGGAAAT TCGCGATCGC TTAGGCTTTC TTGTCAACGT AGGTCTCAAT
TATTTGAGCC TGTCACGTTC GGCTGAAACC CTTTCCGGCG GTGAAGCCCA GCGTATTCGA
CTCGCCAGCC AAATCGGTGC AGGGCTCGTC GGCGTGATGT ATGTGCTCGA CGAACCCTCA
ATTGGTCTGC ATCAAAGGGA TAACGAACGC CTGTTGCAAA CCCTGATCCA TCTGCGGGAT
TTGGGCAACA CTGTGATTGT GGTTGAGCAT GACGAAGATG CGATCCGTAT GGCGGATCAT
GTGATCGATA TCGGTCCAGG CGCAGGAGTG CACGGCGGCG AAGTGATTTG CGACGGCCCG
ATAGACAAGA TCATCGCCTG TGAAGCATCT GTCACTGGTC AATATATTTC CGGTAAGCGC
AGCATTCATA TCGATACGCC GCGCATTCCG TTTGACAAAA ACCAAGTCAT CCAATTATTT
GGCGCTCGCG GTAACAACCT GCGCAATGTC GATTTAACCA TTCCTGTGGG ATTATTCACT
TGTGTGACAG GTGTGTCAGG ATCAGGTAAG TCGACCTTAA TCAACGATAC CTTCTTCAAA
ATCGCCCATA GGATGCTCAA CGGAGCGACT GTGGATGAGC CGTCACCCTA TGATCGCATC
GAAGGGATGG AACTGTGCGA CAAAGTGGTC GATATCGACC AAAGCCCGAT TGGCCGCACG
CCGCGCTCGA ATCCTGCCAC TTATACGGGC ATCTTCACCC CGATCCGCGA GATTTTTGCC
GGCACCCAAG AGTCACGTAC TCGGGGTTAT CAAGTCGGCC GTTTCTCCTT TAACGTCAAA
GGTGGACGCT GTGAGGCTTG CCAAGGCGAC GGCTTGATCA AGGTCGAAAT GCACTTCCTA
CCCGATGTGT ATGTGCCTTG CGATTCCTGT AAAGGTAAGC GCTATAACCG CGAAACCTTA
GAAGTACGCT ATAAAGGCAA GAATATTCAC GAAGTACTGC AGATGACAGT GGAAGATGCG
CGTCAGTTCT TCGATGCCGT ACCTGCCATT GCCCGTAAGC TACAAACCTT GATGGATGTG
GGTTTGTCCT ATGTGCGTCT CGGCCAAAGT GCGACCACTC TTTCAGGCGG CGAAGCCCAA
AGGGTGAAAC TTGCCAAAGA GTTATCTAAA CGTGACACGG GCCAAACCTT GTATATTTTG
GATGAACCGA CCACGGGCTT ACATTTTGCC GATATTCAAT TGCTGCTCGA CGTGTTGCAT
CGTCTCAAAT CCCACGGCAA CACGATTGTG GTGATTGAGC ATAATCTGGA TGTGATCAAA
ACCGCAGACT GGATTATCGA CTTAGGCCCA GAAGGTGGCG GTGGTGGTGG TATGATTTTA
GCCACAGGCA CGCCGGAAGA AGTCGCCGAG CATCCAACCT CCCACACGGC ACGCTTCTTA
AAGCCACTGC TAAAACGGGA TGTTGAACTG GCAAAGGCTA AAAAAGCCAA GGCGTAA
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| Protein sequence | MDKIEIRGAR THNLKNINLT IPRDKLIVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY
ARQFLSLMEK PDVDHIEGLS PAISIEQKST SHNPRSTVGT ITEIYDYLRL LFARVGEPRC
PTHNQPLAAQ TVSQMVDKVL EMPQDSRLML LAPVVNARKG EHVKLLEGLA AQGYIRARID
GEVCDLTDPP TLDLHVKHTI EVVVDRFKVR DDIQQRLAES FETALELSGG IAIVASMNEG
DGKTKSDELI FSANFACPHC GYSMAELEPR IFSFNNPAGA CPTCDGLGVQ QFFDPERVIT
NTELSLAGGA IRGWDRRNFY YFQMLSSLAE HYKFDVEAPF EQLSEKVRKI VLYGSGKESI
AFKYINDRGD VVVRNHPFEG ILNNMDRRYR ETESNSVRDE LAKFINTQAC QSCGGSRLRE
EARHVFIGDL NLPKLTTWSI GEALDYFEKV EFSGQKAQIA EKILKEIRDR LGFLVNVGLN
YLSLSRSAET LSGGEAQRIR LASQIGAGLV GVMYVLDEPS IGLHQRDNER LLQTLIHLRD
LGNTVIVVEH DEDAIRMADH VIDIGPGAGV HGGEVICDGP IDKIIACEAS VTGQYISGKR
SIHIDTPRIP FDKNQVIQLF GARGNNLRNV DLTIPVGLFT CVTGVSGSGK STLINDTFFK
IAHRMLNGAT VDEPSPYDRI EGMELCDKVV DIDQSPIGRT PRSNPATYTG IFTPIREIFA
GTQESRTRGY QVGRFSFNVK GGRCEACQGD GLIKVEMHFL PDVYVPCDSC KGKRYNRETL
EVRYKGKNIH EVLQMTVEDA RQFFDAVPAI ARKLQTLMDV GLSYVRLGQS ATTLSGGEAQ
RVKLAKELSK RDTGQTLYIL DEPTTGLHFA DIQLLLDVLH RLKSHGNTIV VIEHNLDVIK
TADWIIDLGP EGGGGGGMIL ATGTPEEVAE HPTSHTARFL KPLLKRDVEL AKAKKAKA
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