Gene Sputcn32_0626 details

Gene Information

• Locus tag: Sputcn32_0626
• ID: 5080416
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 691195
• End bp: 693183
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640497751
• Product: outer membrane protein
• Protein accession: YP_001182155
• Protein GI: 146291731
• TIGRFAM ID: [TIGR03509] decaheme-associated outer membrane protein, MtrB/PioB family

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTTTA AACTTAATAT CATTACCTTG GGATTACTTG CAGCTACCAG TGGTGTGAGT 
GCCGCAGACT TTTCTGTGCA CAAAGCTAAT CTGCAAGGGT TAAAGTTGGA TGCTTATCAG 
TGTAAAAGCT GCATAGGAGA GAAGCGCTAC CAAGGTGAAC TGCAGTTAAG TGCAGGCTGG 
GCCGAGAATA ATGATATTTA TTCGGGAAAT GCGTTTGGCG ATGCCAGTGA TGGGTTGCGA 
GCAGCTATGG ATGCGGACGT GCGTTACCGC AATTCGGGCT ATGAAGCTAA TGTTCAAGCA 
CATCAATTGG GATTAGAGAA CAGCTATGTC CATCTCGATG CGGGTCGTTC TGGACTGTAT 
GCCCTGAACC TTGATTATCA ATTATTGACT CGATACGACA GCCGGGCGCA AACGCAGTTA 
TGGCACAACA ATGGCTTACT TTTGCCTGAC AGTGCGATTC GATATCTCGA TTTGCAACAG 
GAACGCGAAA AGGTGGGGTT GGGATTAGTC GCGCAATATG GCGTCATGCA GGCTTTTATT 
AACTACGACC ACGAACAAAA AACGGGTAAT CGCCGCAGTA GTTTAGTGGC TCCTCGCCCC 
GTTAATTTTG CTCTACCTGT TGATGCTAAT ACGGAAAATC TCAATGCAGG CTTGAATATT 
TCAGGTGAAA ATTGGTTAAG CGAGCTGGCT TACAATGGCA GTTTTTACCG AAATAATATT 
GATAACTTAA GCTTACCTTA CTTGCCCGAT GTTTATGCAG CCACACCTGA TAATGATGCC 
CATCAAGTCT CGTTATCGGG TCAATATATG CTTGGACGTG GCACTGTCAA TGGCCGTGTT 
GCCGCTGGAC GGATGATACA AGATGGCGAT TTAATCCAAG TGAGTGGTAA TCCGTTACAG 
AGCTGGGATG GTCAGGTTGA TACCTTAGAT GCACGGGTTG GCTTTAGCAA TATGCTAAGC 
CCGCGATGGC GTGTTAACGG CCAAGTTGAC TATAGCGAAC GCGATAACAA AAGTTCGGTA 
TGGGAGTTTG CGCAACTAGA GTTTGATAAC GTCAGTGGTG CGTTTAAGCA AAATGTCCCC 
ATGGACATCG AAAGACTCAC ATACAAACTC CACAGCAGTT ACCGTTTTAA CAGTCAATAT 
CGCCTCATGG GAGGTTATGA CCGTAAAGAG GTGGAACGCA GCTACCTTGA GCGTGAACAA 
ACCCATGACG ACGCATTTTG GGCCAAGCTG AATGTAAGAG CCTTGGCAAA CACTGTGATT 
GATTTTGGTG GGCGTTACGA GAACCGCAGC GGCTCTGTCT ACAACGCTGT TGAAAATATC 
TCGATTGAAG AAAATCCGCT ATTGCGTAAG TTTTATCTCG CAGACCGCGA GCGTCAAGCG 
GTTGATCTGA AGGTGAATTA TGTACCGCTT TCGTGGTTGA CTCTTGATTT AAATGGATAT 
TATGCCAAGG ATGATTACGC TAAAACCATT ATAGGCCTAA CTGAATCAAC CGATTATGGT 
TATGACCTGC AACTGGGTAT GCAAGTATCC GAACAATTGC ACCTCTATGC GTCAGCAAGT 
CAACAATGGA TAGACTCCGC CCTTGCGGGT AGTCAATCGT TTTCGTCCCC AGACTGGTAT 
AGCGATGTTG CCGATGAATT CATCAATTTA GGGGCAGGGT TTACCTATAG CGGTTTATTG 
GATGACAGGC TGACCCTTGG AGGGAATTAT CTATTCTCCA ACTCCGCAAG CGATACCTTA 
ATCACCTATA ACGAGGCCCA GCCATATGGT GATTACTACT CCTATAACCA TAGTATCGAG 
TTATATGGGC GTTATGCCTT GAGTGAGAGC GTAGGGCTCA AGCTGAGTTA CCAGTACGAA 
CGTTATTACG ATACAGACTA TGCCCAATCA GGCGTCAATA GCATACCAGG GTTAATTACT 
CTGGGAGAAC TTAACCATAA CTACAATGCG CATTTGCTGA TGTTTACCTT CAGCTACCTG 
CTGCCTTGA 

 

Protein sequence

MSFKLNIITL GLLAATSGVS AADFSVHKAN LQGLKLDAYQ CKSCIGEKRY QGELQLSAGW 
AENNDIYSGN AFGDASDGLR AAMDADVRYR NSGYEANVQA HQLGLENSYV HLDAGRSGLY 
ALNLDYQLLT RYDSRAQTQL WHNNGLLLPD SAIRYLDLQQ EREKVGLGLV AQYGVMQAFI 
NYDHEQKTGN RRSSLVAPRP VNFALPVDAN TENLNAGLNI SGENWLSELA YNGSFYRNNI 
DNLSLPYLPD VYAATPDNDA HQVSLSGQYM LGRGTVNGRV AAGRMIQDGD LIQVSGNPLQ 
SWDGQVDTLD ARVGFSNMLS PRWRVNGQVD YSERDNKSSV WEFAQLEFDN VSGAFKQNVP 
MDIERLTYKL HSSYRFNSQY RLMGGYDRKE VERSYLEREQ THDDAFWAKL NVRALANTVI 
DFGGRYENRS GSVYNAVENI SIEENPLLRK FYLADRERQA VDLKVNYVPL SWLTLDLNGY 
YAKDDYAKTI IGLTESTDYG YDLQLGMQVS EQLHLYASAS QQWIDSALAG SQSFSSPDWY 
SDVADEFINL GAGFTYSGLL DDRLTLGGNY LFSNSASDTL ITYNEAQPYG DYYSYNHSIE 
LYGRYALSES VGLKLSYQYE RYYDTDYAQS GVNSIPGLIT LGELNHNYNA HLLMFTFSYL 
LP