| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0617 |
|---|
| Symbol | metL |
|---|
| ID | 5080407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 679147 |
|---|
| End bp | 681540 |
|---|
| Gene Length | 2394 bp |
|---|
| Protein Length | 797 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640497743 |
|---|
| Product | bifunctional aspartate kinase II/homoserine dehydrogenase II |
|---|
| Protein accession | YP_001182147 |
|---|
| Protein GI | 146291723 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase
[COG0527] Aspartokinases |
|---|
| TIGRFAM ID | [TIGR00657] aspartate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGTT GTCACTTACA TAAATTTGGT GGCTCCAGTT TAGCGGATGC CGATTGTTAT
CGCCGAGTCG CCCATATCCT GTTAACCCAC GGTCATAGTG ATGATCTCGT GGTGGTCTCT
GCAGCGGGTA AGAGCACGAA TTTTCTGTAT AAGTTATTGT CGCTGCGTGA TGCGGCTCAG
CTATGGCAAG AAGAATTACA AGTGCTGATC AGCTACCAAC AGGGGTTGAT TGAGCAGTTG
TTGTCGCATG AACAGGCCCG CGATCTGCGT GAGCGTTTGG CGACTGATAA AGCGCAACTT
ATCAGCTTAT TATCCTTAGA CGTTCGCAAC GATTACCAAA TCAACCATGT GGTGAGCTTT
GGCGAACGTT GGTCTGCACG CTTAATGGCG GCGCTGCTGC GCGAATCTGG CGTGGCGGCA
AGCCATGTGG ATGCCTGTTC AATTTTAGTG GCCGATGAAG CTGCTGTGCC GCAAATTCGG
GTACAGGAAT CCCGCGCTAA AGTACAAGCC CTATTAGCCG CGCATCCCAA TGAACGCTTA
GTGATCACAG GCTTTATCTG CGCTAACGAG CGTGGCGATA CCTTGTTACT TGGTCGTAAT
GGTTCAGATT TTAGCGCTAG CCTGATTGCT AGCCTTGCCG ATATCGAGCG CGTGACCATT
TGGACTGATG TGGAAGGGGT ATTCAACGCC GATCCTAATA AAATCAACGA TGCTAAGTTA
CTAAAAAGCA TGTCACTTGC CGAAGCCGAT CGCCTAGCAC GTTTAGGCTC GCCAGTATTG
CATTCGCGTA CTTTGCAGCC GCTATTCAAT ACCGAAGTGA GCTTAGCGGT GCGCTCAAGT
TATGCGTCCC ACACCGACTT TACCCTGATA GCGCCCCACA GTTCATCGGC GAGTGCGCCT
GTGGTGACTA ACCTCAATGC TGTTGTCCTG TTCGGCTTTA AACTCACAGG GGAGTTAACT
CGTTTATTAG ATTTATTGAT TGCTGCGGGT TTAACGCCAT TGGCCCATTG GACATCTGCC
CATCAAAGGG TTGAACTTGC CTATACCGCT GAGAATCAAA AACAAGTTCA AAGATTACTC
GATGCTGAGG CAGAAGCATT AGGGATCAGC GATCAGCAGA TCAACACAGA TTATGGTTTA
GTCGCATTAG TGAGTGCCGA CGCCGAACAT TATCGCCGCA GCTTCGCGCG TTTACTGAGC
CGTGATGCTA AACCTTTGTT CAGTGGCGAT TTAAGCCTAG TGACGCTAGT GCCACAGTCA
CAGGTGAATC TGTTAACCCA AAAAGTCCAC CGCCGCTGTG CTGGCCCGCG TAAACGCATT
GGTATCTTGT TATTGGGTGT CGGTAATATC GGCGAGGCTT GGGTCAATCT CTTTAAGTCT
GTGTCGCCCT CCCTTGACCA TGAATTGGAG GCTAAGGTTG AGTTAGTGGG ATTAGTTAGC
TCAAGTAAGG CGTTGATCAA ATCCGCTGGC ATTAACTTAG CCAATTGGCA GGCTGAATTC
GATACGCAGG CTACACCTTG GCAATATGAG CATTTATTTG AGCAGTTAGA GCAAGTTAAC
TGCGATGAGC TGGTGGCCTT AGATATTAGT GCCAGCGCCA GTTTGACGCT GCAATATCCA
GAGCTATTCG AGCGCGGTAT CCATGTGGTG AGCGCGAATA AACTCGCGGG TTCGGGCCGA
TTACCTTTCT ACCGTGAGTT AAAGCAGCAA CTGGGTAATC GTCGCTTATT TTGGCGCTAC
AATGCTAGTT GCGGCGCCGG CTTGCCTATC CAGCATGCGC TAAATGATCT GCGTAATAGC
GGTGATAGTG TTGAGGCCGT AGGCGGGATT TTCTCCGGCA CCCTGTGTTG GTTATTTGAG
AAATACGATA CCAGCAAGCC ATTTTCAGAA TTAGTGATTG AAGCCAGAGG CTTAGGTATT
ACTGAACCCG ATCCCCGCGA CGATCTCTCC GGCCGTGATA TGCAGCGTAA GTTGCTTATT
TTAGCTCGTG AAATTGGCCT TGAAATAGAG CTTGAAGATA TTGAGCTGCG TTCATTAGTG
CCCGCACATT TAGCGGATAT TCCCTTAGAG CAGTTTCTTG CTCGCATTGC CGAGTTAGAT
GCCGATTTGC TGCAACAATA TGGTGCGGCG GCTGAGCAGA ATAAGGTGCT CAGATACGTG
GCATCCTTAG ACAACAGCGG CCCAGAGCTT AAGGCCGAAG TGGGCTTGCA GTGGATTGAT
ACCGATCATC CCTATGCCAA TTTAACCCCG GGGGATAACG TGTTTGTGAT CCGCAGCGCC
TTCTATCAAG GTAATCCGCT GATCATCCGT GGACCGGGCG CAGGCCGCGA AGTGACAGCG
GCGGCGGTGC AGTCAGACTT GACCCAGATT TGTCGCGATC TATTGCAGGA ATAG
|
|---|
| Protein sequence | MARCHLHKFG GSSLADADCY RRVAHILLTH GHSDDLVVVS AAGKSTNFLY KLLSLRDAAQ
LWQEELQVLI SYQQGLIEQL LSHEQARDLR ERLATDKAQL ISLLSLDVRN DYQINHVVSF
GERWSARLMA ALLRESGVAA SHVDACSILV ADEAAVPQIR VQESRAKVQA LLAAHPNERL
VITGFICANE RGDTLLLGRN GSDFSASLIA SLADIERVTI WTDVEGVFNA DPNKINDAKL
LKSMSLAEAD RLARLGSPVL HSRTLQPLFN TEVSLAVRSS YASHTDFTLI APHSSSASAP
VVTNLNAVVL FGFKLTGELT RLLDLLIAAG LTPLAHWTSA HQRVELAYTA ENQKQVQRLL
DAEAEALGIS DQQINTDYGL VALVSADAEH YRRSFARLLS RDAKPLFSGD LSLVTLVPQS
QVNLLTQKVH RRCAGPRKRI GILLLGVGNI GEAWVNLFKS VSPSLDHELE AKVELVGLVS
SSKALIKSAG INLANWQAEF DTQATPWQYE HLFEQLEQVN CDELVALDIS ASASLTLQYP
ELFERGIHVV SANKLAGSGR LPFYRELKQQ LGNRRLFWRY NASCGAGLPI QHALNDLRNS
GDSVEAVGGI FSGTLCWLFE KYDTSKPFSE LVIEARGLGI TEPDPRDDLS GRDMQRKLLI
LAREIGLEIE LEDIELRSLV PAHLADIPLE QFLARIAELD ADLLQQYGAA AEQNKVLRYV
ASLDNSGPEL KAEVGLQWID TDHPYANLTP GDNVFVIRSA FYQGNPLIIR GPGAGREVTA
AAVQSDLTQI CRDLLQE
|
|---|
| |