Gene Sputcn32_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0600 
Symbol 
ID5080638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp660773 
End bp661486 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content47% 
IMG OID640497727 
Producthypothetical protein 
Protein accessionYP_001182131 
Protein GI146291707 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATT CTCTTTTAGC GGTATTGGTG GCGGGTGGTC TTTTTTCTAG CGCGTTTATG 
GCGCCAGCAG TGCTCGCCGC TGAGGTCGAT TTTCCGCATA TTGAAACCAT GGGTGTGAGC 
CAAATTCAAG TCGAGCCGGA TATGGCGGAT GTGAATGTGG AAGTGGCCGT GACCGAAAAA 
ACCGCTAAAG CCGCTAAAGA TAATTCCGAT GCGGCAGTGG CTAAGTTTAT TGCCCGTTTA 
ACGGCTGCGG GTGTAGCAAA GGATCAAATC CAAAGCGCCA ATTTAAATCT GCAGCCGCAA 
TATGTGTATG TGCAGGATAA AGCACCAGAA TTGGCGGGTT ATACCGCCAG TCGTCAAATT 
ACCGTGACGG TAACAGACTT AAGCCGCTTG AATGCAATCT TAGATTCAGC CTTAGAAGAG 
GGCATGAATC GGGTGAATAA CATTGCCCTT AAGTCGAGCA AAGAAGCAGA ATATGTTGCA 
AAAGCACGTC AAGAGGCGAT AGCGGATGCT AAGCAAAAAG CCGAATCTTT GGCTAAAGGT 
TTTGGTGAAA ACCTAGGTAA GATCTGGCAG ATCCGTTATT ACGATCAACG TCCAGTGCAA 
CCCGTGATGC TGCGCATGAG CGCCAAAGCC GATGCCATAG GCGCCGCCGA GAGCTATCAA 
TACGGCCAAG TAAGCATAGA AGATAGAGTC GAAGTGATTT ATAAACTGAA GTAA
 
Protein sequence
MKNSLLAVLV AGGLFSSAFM APAVLAAEVD FPHIETMGVS QIQVEPDMAD VNVEVAVTEK 
TAKAAKDNSD AAVAKFIARL TAAGVAKDQI QSANLNLQPQ YVYVQDKAPE LAGYTASRQI 
TVTVTDLSRL NAILDSALEE GMNRVNNIAL KSSKEAEYVA KARQEAIADA KQKAESLAKG 
FGENLGKIWQ IRYYDQRPVQ PVMLRMSAKA DAIGAAESYQ YGQVSIEDRV EVIYKLK