| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0569 |
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| Symbol | |
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| ID | 5080607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 617752 |
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| End bp | 618240 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640497696 |
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| Product | MSHA pilin protein MshC |
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| Protein accession | YP_001182100 |
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| Protein GI | 146291676 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAAT TTTCAATGGC AAAACAGGCG GGATTTACCT TAGTTGAATT AGTCACAACG
GTCATCTTGA TTGGGATCCT TTCTGTGACC GTACTGCCGC GTCTGTTTAC ACAGTCATCC
TATAGTGCTT TTAGCTTGCG TAATGAATTT ATGGCAGAGC TGCGTCAAGT GCAACAAAGA
GCATTGAACA ATACCGATAG ATGTTATCGG ATCGCTGTCT CCAGTGTGGG TTATCAAGTG
AGTCAATTTG CGACCCGTGA TAATACAGGT TGCACGGGCG CGCCGCTTTC TCCAGAACCG
CTATATACCC AAGCCTTTAA AGGTGGTGCT ACGCTTGCGT TATCCAGTAG CAATGCCAGT
AGTTTTAATA TTGATTTTGA TATTAATGGT AGACCCTCAT TAGCTTGTAA TGGTCACTGT
ATCAAAGTCA TCGCCAACGA TATTGTAAGC ATCAATATCT CGAGCGAGGG ATATATCTAT
GCCAACTAA
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| Protein sequence | MAKFSMAKQA GFTLVELVTT VILIGILSVT VLPRLFTQSS YSAFSLRNEF MAELRQVQQR
ALNNTDRCYR IAVSSVGYQV SQFATRDNTG CTGAPLSPEP LYTQAFKGGA TLALSSSNAS
SFNIDFDING RPSLACNGHC IKVIANDIVS INISSEGYIY AN
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