| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0517 |
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| Symbol | |
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| ID | 5078043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 562566 |
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| End bp | 565019 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640497644 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001182048 |
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| Protein GI | 146291624 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.069894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGTTAA CCTTCGTTCG GTCTAATTGT TGTTTTATAT ATACATTATT GAGAGGTTGT
ATGCGTCTAG CCGTTATCGC ATTAGCAGTA TCATCTACAT TGACTATGTC TGCCGCACAA
GCAGATTCAC AACACGCTGC CGTTGAAAAA ATTGAAGTTA TCGGCTCACG TATTGCCTTG
CGCACGGCAA CCGACAGTGT TGCCCCTGTC GATATCATCA CAGCTGAACA ACTCGAATCA
ACAGGTATGA CGGAAACCGC GAAAGCGCTG CAATTTGCGG CGCCAAGCTA TAGCTTTCCA
TTCTCCTCGG TGACTGACGG TTCAGATGCG GTTCGCCCCG CGAGCTTACG CGGCCTGTCG
CCAGACCACA CCTTAGTACT CGTAAATGGC AAGCGTCGCC ATGGTTCTGC CCTAGTACAT
TTAAGTGGCA CCATGGGAAA AGGCTCCTCT AACGTCGATT TAAATGCGAT TCCAATGACA
GCGATAAAAC GCATTGAAAT TCTCCGAGAT GGTGCCTCAG CGCAATACGG CTCGGATGCG
ATTGCCGGCG TGATTAACGT GGTACTCAAG GACAGCGATC AAGGTGGTAG CGTCTCGGCG
CAAGCCGGAC AAACCTACCA AGGTGACGGT GAGCAATGGC GTGTAGGCGT TAACCATGGG
ATCAGTTTAA GCAATGATGG CTTTGTGAAT GTCGCCCTAG AAGCGCATCA CAAAGACAGC
ACAAACCGCG CAGGACTCGA TCCACGGCAG CAATACCCTA AACTAGCAGA TGGTTCTGAC
GATCCGCGCG AAGCGACATT TAACCGTAAG AGCCACCAGG TTGGTGATGC CGAATATGAT
AATGTCGGTT TATTTATCAA TGCTGCTCAG CCTATCTCTA CTGATGGAAA ACTGTATGCC
TTTGGCGGTA TCAGTCAACG TGAGACTAAA TCAGGGGCCT TTTACCGTTT AGCTCTCGAT
GCCCGTAACT TACCCGAAGT GTATCCCGAC GGTTTTTTAC CGCAAATTAA CCCCAAAATT
ATCGATTCTT CTCTTACCCT AGGCTATGAA TTCAATCTAA GTGATTGGGA CATTGATACC
TCTGTGGGAT ATGGTAAAAA CTCATTCAAC TATAATATCG TCAATACGTT AAATGCTTCA
TTAGGTCCTG AAAGTCCTAC TGAATTCGAT GCTGGAACAT TGGCTACCCG TGAAACCAAT
ATCAATTTAG ATATTTCTCG CTATTTTGCC TTTGTGAACG ATTCTGAAAT TCTGTTTGCG
ACGGGGGTTT CATGGCGTCA AAACGGTTAT GAAATTGAAG CCGGAGAAGA AGGCTCCTAT
ATCAATGGTG GCTACAATGG TAAAGCACCC GGTAGCCAAG GTTTCACCGG TTTTACCCCT
GAGTCCGAGG TCGATGAAAC ACGCGATAAT ACAGGCATTT ATGCCGAACT TGAAAACCAG
CTAACCAACG AGTTTTATTG GGCTGCGGCG CTGCGCTACG AAAACTATTC TGACTTTGGT
GGCAATACAA GCTGGAAGTT AGCGGGTCGT TATGATTTTA CCGACAACTT AGCCCTGCGT
GGCACTATCA ATACAGGCTT TAGAGCGCCA AGCGTACAAC AACTGTACTT CAGCAACATA
TCAACCCTAT TTAATCCCGA TCCTGTGACA GGCCAGCTAG TTCCAGTTGA ATCAGGCACC
TTCAACACCT TATCACCAGT GACAAAGGCG CTTGGAATTA ACGAACTAGA ACCTGAAATA
TCGCAATCAT TTAGCCTCGG TCTTGTTTAT ACCAATGACT CTGGCCTCGC GGTAACACTC
GACACTTACC AAATCGAGAT TGATGATCGC ATCATCTTAT CTGGCTCCCT AAGAGCGACT
GACAGCCCTG CGGTTGCAGC GGCACTTGCG GGCACCAATG CCGATTCAGC ACGATTTTTC
GTCAATGCCG TCGATAGCCG CACTCGCGGG GTCGATCTCG TTGTTAGCCA AGATATTGAT
ATTGGCACTT GGGGCGATTT ACGGGCGAAC TTAGCCTATG CCTATAATAA AACCGAGATC
CAAGACATCA ATCTGCCGTC TATTTTAGGC GGATTAGAAA AGAAACTCTT TGATGGTATA
GAAAGAACCC GCATGACGTC TGCTACGCCG CATAACACGG GCAGTATTGG GCTAACCCAT
GAGTTAGGGG ACTTTAAAAC CAATGCTCGC TTAAACTACT TTGGTGACTA TAGTGAAGGT
TATTCAACGG GCGATGTAAA CTATAGCGAT CAATGGGTAA TGGATCTGTC GGTAAGATAC
GCCGCCACTG ATGCGCTAAG CTTTACCGCT GGGGTGCAAA ACTTGTTTGA TGTGTATCCA
GAAAAACGAC CAGATAACAA TAACTTCAAT GGTATCTTCG TCTACCCATT AACCAATACC
CCCTTTGGCT TTAATGGTGG CTACTACTTC TTAGAAGCCA AATACACTTA CTAA
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| Protein sequence | MVLTFVRSNC CFIYTLLRGC MRLAVIALAV SSTLTMSAAQ ADSQHAAVEK IEVIGSRIAL
RTATDSVAPV DIITAEQLES TGMTETAKAL QFAAPSYSFP FSSVTDGSDA VRPASLRGLS
PDHTLVLVNG KRRHGSALVH LSGTMGKGSS NVDLNAIPMT AIKRIEILRD GASAQYGSDA
IAGVINVVLK DSDQGGSVSA QAGQTYQGDG EQWRVGVNHG ISLSNDGFVN VALEAHHKDS
TNRAGLDPRQ QYPKLADGSD DPREATFNRK SHQVGDAEYD NVGLFINAAQ PISTDGKLYA
FGGISQRETK SGAFYRLALD ARNLPEVYPD GFLPQINPKI IDSSLTLGYE FNLSDWDIDT
SVGYGKNSFN YNIVNTLNAS LGPESPTEFD AGTLATRETN INLDISRYFA FVNDSEILFA
TGVSWRQNGY EIEAGEEGSY INGGYNGKAP GSQGFTGFTP ESEVDETRDN TGIYAELENQ
LTNEFYWAAA LRYENYSDFG GNTSWKLAGR YDFTDNLALR GTINTGFRAP SVQQLYFSNI
STLFNPDPVT GQLVPVESGT FNTLSPVTKA LGINELEPEI SQSFSLGLVY TNDSGLAVTL
DTYQIEIDDR IILSGSLRAT DSPAVAAALA GTNADSARFF VNAVDSRTRG VDLVVSQDID
IGTWGDLRAN LAYAYNKTEI QDINLPSILG GLEKKLFDGI ERTRMTSATP HNTGSIGLTH
ELGDFKTNAR LNYFGDYSEG YSTGDVNYSD QWVMDLSVRY AATDALSFTA GVQNLFDVYP
EKRPDNNNFN GIFVYPLTNT PFGFNGGYYF LEAKYTY
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