Gene Sputcn32_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0516 
Symbol 
ID5078042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp561969 
End bp562430 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content41% 
IMG OID640497643 
Producthypothetical protein 
Protein accessionYP_001182047 
Protein GI146291623 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2731] Beta-galactosidase, beta subunit 
TIGRFAM ID[TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGTTG ATACTTTAGC TAACCGTCAT ATTTATCAAA CCCTAAATCC CCGTATTGCG 
AGTGCGCTGG AGCATTTAGC AACGACTGAC TTTAGTCAGC TACCTGTGGG AAATTACCCT 
CTCGATGGAG ATGATATTTT TGTGATAGTT AACGACTACC ACACAAAACA TCAATCAACT 
GAATCCTTTG AAGCGCACCA AAAATATATC GACGTGCAAT ATGTTTTCAG CGGAGAAGAA 
GAGTTTGGTT ACTTGCCTTT AGTCGATCAG ACTCCCTCAA AACCCTATTT TGAAAAACAT 
GATTATGCAG GATTTGATTA CGAGTCAAAT AAAGAAAATG CCTCTTATAT CAAACTCAAA 
GCGGGCATGT TTGCGCTATT TTTCCCTGGC GACATACATA TGCCCGGTAC AGGGCATCCT 
GCGACCGCAG TACGCAAGGT CGTGATAAAA GTCAAAGTGT AA
 
Protein sequence
MIVDTLANRH IYQTLNPRIA SALEHLATTD FSQLPVGNYP LDGDDIFVIV NDYHTKHQST 
ESFEAHQKYI DVQYVFSGEE EFGYLPLVDQ TPSKPYFEKH DYAGFDYESN KENASYIKLK 
AGMFALFFPG DIHMPGTGHP ATAVRKVVIK VKV