Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0466 |
Symbol | |
ID | 5080721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 499197 |
End bp | 499715 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640497586 |
Product | hypothetical protein |
Protein accession | YP_001181997 |
Protein GI | 146291573 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0083717 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCCTC AATTTTTTGA ACTCGCCCCT TTAACCCAAA CCTCTATCTT CAGCTTTATC GTCTTATTGC TCGGGATCGT AGGTATCTTG CTGATGTTGT GGCTAAAAAA CATGCCTAAA ATAGCAAAAT CCGCGAGTTT AGGCATATTG CTGGTGATGA TGGGCGGATT TTCTTGGGTC TTTTATCAAT CCAATAGCGC CGAATTAGTG TTAACCGATA CAGAGCTCAC ATTGGATGTT CCCTTCTATA AAGTGCAGTT ATCCCGCGCG GATTTATTAC CTGCCGAGGC GCGCATAGTC GATTTGCAGC AAGAGGCAGA TTTAACACCG AGCTTTAAAA CGAATGGTAT AGGTATGCCT GGATTTCAAT TAGGTTGGTT TAACTTACAG GGGAAGACTA AAGCATTTTT GGCGATAACA GATAAATCGC AGTTAGTGTT AGTGCCAACG ACTAAAGGCT ACAGTTTATT ACTGACAGTA CCACAAGGGA GTGAGTTTTT AGCACAGTTA CAGAAGTAA
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Protein sequence | MSPQFFELAP LTQTSIFSFI VLLLGIVGIL LMLWLKNMPK IAKSASLGIL LVMMGGFSWV FYQSNSAELV LTDTELTLDV PFYKVQLSRA DLLPAEARIV DLQQEADLTP SFKTNGIGMP GFQLGWFNLQ GKTKAFLAIT DKSQLVLVPT TKGYSLLLTV PQGSEFLAQL QK
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