| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0415 |
|---|
| Symbol | |
|---|
| ID | 5081399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 449985 |
|---|
| End bp | 452171 |
|---|
| Gene Length | 2187 bp |
|---|
| Protein Length | 728 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640497535 |
|---|
| Product | catalase/peroxidase HPI |
|---|
| Protein accession | YP_001181946 |
|---|
| Protein GI | 146291522 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0376] Catalase (peroxidase I) |
|---|
| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGA CTCACAGCTC TCAAGGTAAA TGCCCAGTAA TGCATGGTGG TAATACCTCC
GTCACAACCA ATAATATGGA CTGGTGGCCT AAGGCATTAA ATCTCGATAT TTTGCATCAG
CACGACAAAA AAACGGATCC AATGGATCCT ACTTTTAATT ACAGCGAAGC ATTTAAAACG
CTCGATCTTG CGGCGGTAAA ACAAGATTTA TATGCCTTAA TGACAGATAG CCAAGACTGG
TGGCCAGCGG ACTGGGGACA CTACGGCGGA TTAATGATCC GTATGGCGTG GCATTCTGCG
GGTACTTACC GTATTGCCGA TGGCCGTGGT GGTGCAGGTA CGGGTAATCA AAGGTTTGCT
CCACTTAATA GCTGGCCCGA TAACGCTAAC CTCGACAAGG CTCGCCGTTT ACTTTGGCCG
ATCAAGAAGA AATACGGCAA TAAGCTGTCT TGGGCTGATT TGATCATACT TGCAGGTAAT
GTTGCCTATG AGTCTATGGG TTTGAAAACA TATGGTTTTG CAGGTGGCCG TGCCGATATT
TGGCATCCAG AGAAAGACAT TTACTGGGGC TCAGAAAAAC AATGGCTTGC ACCGAGCGAT
AATCCCAACA GCCGTTATTC TGGGGAGCGC GATCTCGAAA ATCCATTGGC CGCTGTGATG
ATGGGGCTAA TTTATGTGAA TCCTGAAGGC GTAGATGGTA ATCCTGATCC TCTTCGAACC
GCACAAGATA TAAGAATAAC CTTCGCTCGT ATGGCGATGG ATGATGAAGA AACGGTTGCC
CTGACCGCGG GCGGACATAC TGTGGGTAAA TGCCATGGTA ATGGTAAGGC GCAGAATCTT
GGTCCCGAGC CCGAGGCTGA GGATGTTGAA GCCCAAGGTT TAGGTTGGCT TAATAAGCAC
GGTCGAGGCG TTGGCCGTAA TACTGTCACT AGCGGTATTG AAGGGGCTTG GACCACCCAT
CCGACCCAAT GGGACAACGG CTATTTCTCA TTGTTACTTG GTTATGATTG GGAACTGAAA
AAGAGCCCTG CAGGTGCGTG GCAATGGGAA CCCATTAATA TCAAAGAAGA AGATAAACCT
GTCGATGTTG AAGATCCGAC GATTCGCCAC AATCCAATAA TGACAGATGC CGACATGGCG
ATGAAAATGG ATCCTGAATA TCGGAAAATT TCTGAGAAGT TCTATAAAGA TCCTGCTTAT
TTCTCTGAAG TCTTTGCCCG TGCTTGGTTC AAATTGACCC ACCGCGATTT AGGTCCTAAA
AGCCGTTATC TCGGCCCAGA AGTGCCTGCA GAAGATTTAA TTTGGCAGGA CCCGATTCCA
CAGGTGGATT ACCGCCTCTC TGATGATGAC ATTACCGCAT TAAAAGCGAA AATTTTGGCA
TCAGGATTGA GTATTGCTGA GCTTGTAACA ACCGCTTGGG ATAGCGCACG CACTTTCCGC
GGCTCTGATT ATCGCGGTGG TGCCAATGGT GCCCGCATTC GTCTCGCACC ACAAAAGGAT
TGGGAAGGTA ATGAACCCGT CCGTTTGCAA AAAGTACTCA AAGTGCTAAC CGATATTCAG
ACTGGTTTGA GTCAAAAAGT CAGTATTGCC GACTTAATTG TATTGGGTGG AACCGCAGCC
GTAGAAAAAG CGGCCCAAGA TGCAGGGGTG AATATTCGAG TACCATTCGC TTCTGGCCGT
GGTGATGCTT CACAGGAGAT GACGGATATA GAATCATTTG CCGTGCTTGA GCCCTTACAC
GATGCCTATC GCAACTGGCA GAAAAAGGAT TATGTTGTTC AACCTGAAGA ACTTATGTTA
GATCGCACTC AGCTTATGGG ACTCACAGCC CACGAAATGA CAGTGTTGAT TGGTGGCATG
AGGGTATTAG GTGCCAACTA TGCAGGTAGC GCGCATGGTG TGTTTACGGA TCGTGTGGGT
GTACTCAGTA ATGACTTTTT TGTTAATTTG ACTGACATGT CTTACAACTG GAAACCTGCT
GGCAATAATC TGTACCAGAT TATTGAGCGT AAAACCGGTA CAGTGAAATG GACTGCTACC
CGAGTCGATC TTGTATTTGG TTCTAATTCG GTGCTGAGAT CCTACGCTGA AATTTATGCT
CAAGACGATG CCAAAGAGAA GTTTGTGCAT GACTTTGTGA ATGCATGGAC CAAGGTGATG
AATGCCGACA GATTTGACCT CGCTTAA
|
|---|
| Protein sequence | MDKTHSSQGK CPVMHGGNTS VTTNNMDWWP KALNLDILHQ HDKKTDPMDP TFNYSEAFKT
LDLAAVKQDL YALMTDSQDW WPADWGHYGG LMIRMAWHSA GTYRIADGRG GAGTGNQRFA
PLNSWPDNAN LDKARRLLWP IKKKYGNKLS WADLIILAGN VAYESMGLKT YGFAGGRADI
WHPEKDIYWG SEKQWLAPSD NPNSRYSGER DLENPLAAVM MGLIYVNPEG VDGNPDPLRT
AQDIRITFAR MAMDDEETVA LTAGGHTVGK CHGNGKAQNL GPEPEAEDVE AQGLGWLNKH
GRGVGRNTVT SGIEGAWTTH PTQWDNGYFS LLLGYDWELK KSPAGAWQWE PINIKEEDKP
VDVEDPTIRH NPIMTDADMA MKMDPEYRKI SEKFYKDPAY FSEVFARAWF KLTHRDLGPK
SRYLGPEVPA EDLIWQDPIP QVDYRLSDDD ITALKAKILA SGLSIAELVT TAWDSARTFR
GSDYRGGANG ARIRLAPQKD WEGNEPVRLQ KVLKVLTDIQ TGLSQKVSIA DLIVLGGTAA
VEKAAQDAGV NIRVPFASGR GDASQEMTDI ESFAVLEPLH DAYRNWQKKD YVVQPEELML
DRTQLMGLTA HEMTVLIGGM RVLGANYAGS AHGVFTDRVG VLSNDFFVNL TDMSYNWKPA
GNNLYQIIER KTGTVKWTAT RVDLVFGSNS VLRSYAEIYA QDDAKEKFVH DFVNAWTKVM
NADRFDLA
|
|---|
| |