| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0362 |
|---|
| Symbol | |
|---|
| ID | 5081296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 394188 |
|---|
| End bp | 394652 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640497482 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001181893 |
|---|
| Protein GI | 146291469 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.543281 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCCG CCGTTATTCG CGCTTTTATC AGCCGTAATC CGAGTCGTAA ATCCTTTTGT
ATTTATGCCG TTTTATTATT TTTGACTGAA GTCTTAATCG CTTTATATGC ACCTGCGGGT
TTTATTCGTG GTTTTGTGGG TGATGTACTA GTAGTGATCT TACTGTTTTG TATGGTGCGG
GCTGTCGTTC CGGTTGACAG CCCAGCAGAA AAGTCCCTAG CACAAAACAC AGGCGAGGGC
ATGAAGCGTT TTTTTCAAAC TCCTTGGTTG GCGTTTTCGG TATTGCTGTT TGCCTTTGCT
ATCGAGTTTG GTCAGTATTG GGGTTTAGTC GACAAGCTAG GCTTGGGCGG AAATCGCTTG
GCGCGAATAG TGATAGGTAG CCATTTTGAT CCACTTGATC TCGTGGCGTA TTTTGTCGGT
TATTTGATCT TACTGGGCTG TTATTGGAAA AGCCGTCAGT CCTAG
|
|---|
| Protein sequence | MSAAVIRAFI SRNPSRKSFC IYAVLLFLTE VLIALYAPAG FIRGFVGDVL VVILLFCMVR
AVVPVDSPAE KSLAQNTGEG MKRFFQTPWL AFSVLLFAFA IEFGQYWGLV DKLGLGGNRL
ARIVIGSHFD PLDLVAYFVG YLILLGCYWK SRQS
|
|---|
| |