| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0283 |
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| Symbol | |
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| ID | 5081110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 300207 |
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| End bp | 301745 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640497400 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001181815 |
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| Protein GI | 146291391 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCAT TTAAAACCGT AAAAAAGCAG GCACCCAATG CCGTACTAAT CCTAAGCAGC
TTACTGCTGG GATTACCGTT AAGCCATGCT CAACTATCGA GTGAAAAGGT TTTCGCATCG
GGTACAGCTG GGACCACAGA TCATTCACCG AAAAGTACCG AACTAAACCA AGTAAAAACT
TACACTTGTC CAATGCATCC GGAAGTGCTC AGCCATGAAC CCGGCCGCTG CCCTAAGTGC
AATATGTTTT TAGTTGAAAA GGAAGGCACC GATACTAATT CAGCAGATCC ACATGCTGAA
CATCAACATA CAGATCACTT AGCGACAGAC CATGCGCACA CCTCGACCAC GAAAGCGGCA
AGTCAAGTGT TCGACACACC AACCTCTAAG GCTAACAATC TCGTTAAAAA AACCAGCGAA
GAAACAACAA CTAAATACAT TTGCCCTATG CATGCCCACA TCATCAGCGA TGTGCCCGGT
ACGTGCCCTA TCTGCGGTAT GAATTTAGAA AAAGTCGAAA CGGGCGGCAA TACCCAAGAA
ATCAATATCA ATGTTTCCGG CAGTATGCAG CAAGCGCTGG CACTCAAAGT CGCCAAGGTT
GAACGCGACA CACTGTGGAA ATTTGTCGAA ACCGTTGGAC AAGTGGATTA CGATGAAAGC
CAAATAACGC ATATCCATGC TCGAGTAACG GGTTGGGTTG AAAAACTGAT GGTAAAGTCC
ATGGGAGACA CAGTCAAAAA AGGGCAGCTA CTCTATGAAA TCTATTCACC CGATTTAGTC
AATGCTCAGG ATGATTATTT ACTCGCCTTA GATACCGCCA AAACAGCAGG CAATCAGAGA
TATCAGGATC TTGTTCGTAG AGCAGGCTTA AGACTGTCAT TTTTAGGATT TACCGAGCAA
CAAATCAAGC AATTAGCCGA CTCGCGCCAA ACCCAATATC GGGTACCCTT TTATGCACAA
CAGGATGGTG TAGTCGAAAC ACTGTCTATC CGCGATGGTA TGTATATTGA GCCATCCACC
GAAGTGATGT CGTTAGTCGA TCTCTCTAAG GTATGGGTCA TAGCCGATGT GTTTGAAAAT
GAACAAAGCT GGATAGTCAA AGGCCAACAG GCTGAAGTGG CTGTGCCCGC CATGAACTTA
AGCGGGATAA AAGGCACTAT AGATTATATC TATCCGGAAC TTGATCCTGT CACGCGTAGC
TTGCGAGTGC GTGTTGTGCT CAATAACACC CATGTTTCCC TTAGACCTAA AACCCTCGCT
AAGGTCTCGC TTTTTGGCGG CCCCAATAAA GATACGCTAG TGATCCCACA GGAAGCCTTA
ATTCAAACGG GTAAAGAGAA TCGCGTGATA GTCAAACAAG ACGACAATAG TTTTGCCGCT
AAAGTCGTGA CCGTCGGCAT GATGAGTCAG GGTAAAGCTG AGATTGTCTC GGGCTTAACC
GAGGGCGAGC GCGTGGTGAT CTCAGGGCAA TTTTTACTCG ACTCCGAAGC CAGCCTCAAG
GGCAGCTTAA TGCGTTTAAG CAGCGGTCAT CAGCACTAG
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| Protein sequence | MNPFKTVKKQ APNAVLILSS LLLGLPLSHA QLSSEKVFAS GTAGTTDHSP KSTELNQVKT
YTCPMHPEVL SHEPGRCPKC NMFLVEKEGT DTNSADPHAE HQHTDHLATD HAHTSTTKAA
SQVFDTPTSK ANNLVKKTSE ETTTKYICPM HAHIISDVPG TCPICGMNLE KVETGGNTQE
ININVSGSMQ QALALKVAKV ERDTLWKFVE TVGQVDYDES QITHIHARVT GWVEKLMVKS
MGDTVKKGQL LYEIYSPDLV NAQDDYLLAL DTAKTAGNQR YQDLVRRAGL RLSFLGFTEQ
QIKQLADSRQ TQYRVPFYAQ QDGVVETLSI RDGMYIEPST EVMSLVDLSK VWVIADVFEN
EQSWIVKGQQ AEVAVPAMNL SGIKGTIDYI YPELDPVTRS LRVRVVLNNT HVSLRPKTLA
KVSLFGGPNK DTLVIPQEAL IQTGKENRVI VKQDDNSFAA KVVTVGMMSQ GKAEIVSGLT
EGERVVISGQ FLLDSEASLK GSLMRLSSGH QH
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