Gene Sputcn32_0261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0261 
Symbol 
ID5081088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp277384 
End bp278676 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content48% 
IMG OID640497380 
Productcopper/silver efflux system membrane fusion protein CusB 
Protein accessionYP_001181795 
Protein GI146291371 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCTT TAAAGATAAA ATATGCTGCA ATAATTATCA GCAGCCTCCT AGCAGGAGGG 
CTGATATCGG TTACTGCCTG GCAGTATGTA AACTCATCAC AAAAAACAGT ACAAACAGAA
CAAAAGGCAC CGGAGAAAAA GGTACTTTTC TGGTATGACC CGATGAAACC GGATACCAAA
TTTGATAAAC CCGGAAAATC TCCCTTTATG GATATGGACC TTGTGCCAAA ATATGCTGAT
GAAAGTGGCG ATAAAAGCAA TGGCGGGATC CGTATCGATC CAACCCAGGT TCAGAATCTG
GGATTAAAAA CGCAAAAAGT CACGCGAGGA ATGCTGAATT ATTCTCAGAC AATTCCGGCT
AATGTCAGTT ACAACGAATA TCAGTTTGTC ATTGTGCAGG CGCGCTCTGA CGGTTTCGTC
GAAAAAGTGT ATCCCCTGAC TACTGGCGAT CATGTGAAGA AAGGCACTCC GCTTATCGAT
ATCACCATTC CTGAATGGGT TGAGGCACAA AGTGAGTTCC TGCTGCTATC CGGTACAGGC
GGTACGCCAA CCCAGATAAA AGGGGTTCTG GAGCGACTTC GTCTGGCTGG TATGCCGGAA
GAGGATATTC AAAGACTGCG TTCAACCCGC ACAATCCAGA CCCGTTTTAC CATTAAAGCA
CCTATTGATG GTGTCATTAC TGCATTTGAC CTGCGCACCG GCATGAATAT TTCGAAAGAT
AAGGTGGTGG CTCAGATTCA GGGGATGGAC CCGGTCTGGA TCAGCGCTGC AGTGCCGGAA
TCTATCGCCT ATCTGCTGAA AGATACGTCG CAGTTTGAAA TTTCGGTACC GGCTTATCCG
GAAAAAACAT TCCATGTCGA AAAATGGAAC ATTCTTCCCA GCGTGGATCA GACAACCCGT
ACGCTTCAGG TCCGTCTCCA GGTTTCTAAT AAGGATGAGT TTCTCAAGCC GGGCATGAAT
GCCTATCTGA AACTCAATAC CAAGAGCCAG GAGATGCTGC TGATACCAAG CCAGGCCGTT
ATCGATACCG GCAAAGAACA GCGCGTGATT ACTGTTGATG ATGAAGGCAA GTTTGTGCCG
AAACAGATCC ACGTTCTGCA TGAATCACAA CAACAGTCCG GCATCGGCTC CGGCCTGAAT
GAAGGCGATA CCGTGGTGGT CAGTGGTCTG TTCCTCATTG ACTCCGAAGC CAATATTACG
GGCGCGCTGG AACGTATGCG CCATCCTGAA AAAACAGAAA GCAGTATGCC AGCAATGTCT
GACCAGCCTG TAAATAGGCA TTCAGGGCAC TGA
 
Protein sequence
MASLKIKYAA IIISSLLAGG LISVTAWQYV NSSQKTVQTE QKAPEKKVLF WYDPMKPDTK 
FDKPGKSPFM DMDLVPKYAD ESGDKSNGGI RIDPTQVQNL GLKTQKVTRG MLNYSQTIPA
NVSYNEYQFV IVQARSDGFV EKVYPLTTGD HVKKGTPLID ITIPEWVEAQ SEFLLLSGTG
GTPTQIKGVL ERLRLAGMPE EDIQRLRSTR TIQTRFTIKA PIDGVITAFD LRTGMNISKD
KVVAQIQGMD PVWISAAVPE SIAYLLKDTS QFEISVPAYP EKTFHVEKWN ILPSVDQTTR
TLQVRLQVSN KDEFLKPGMN AYLKLNTKSQ EMLLIPSQAV IDTGKEQRVI TVDDEGKFVP
KQIHVLHESQ QQSGIGSGLN EGDTVVVSGL FLIDSEANIT GALERMRHPE KTESSMPAMS
DQPVNRHSGH