Gene Sputcn32_0119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0119 
Symbol 
ID5078945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp135974 
End bp136597 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content44% 
IMG OID640497239 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001181654 
Protein GI146291230 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.376681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCCCG ACACTTGGTT ACTCTATCTT TTTGCCATTG TATTGATTGG CATTTCACCC 
GGACCTATCG CTATGTTGTC TATGTCACAT GGGATCCATT TCGGTAAAAT ACGCAGTATA 
GCTACAGGTC TTGGCAGTGT GAGTGCGGCT TTAATTTTGA TGATGGCCTC TGCTGCAGGA 
TTAGGTGCCG TTATCAGCGC TTCAGACTAT GGCTTTACCT TACTCAAATG GTGTGGTGCT 
GCCTATTTAG TATTTTTAGG TATTAAACTG CTACTGACGA AAAGCCATGC GGCCCCCATT 
GAAGTCAGCC AATTAAAAGG TAAAGGGACA CCTAAACAAC TCTACAAACA GGCTTTTCTT 
GTGGGAATAA GCAATCCAAA AGATTTACTG TTTTTTGCCG CATTGTTTCC GCAATTTATT 
GATATCTCCG CGCCGCAAGT GCCACAACTG ACCCTATTAG CACTTACATG GGCCGTAGTG 
GATTTTGGAT TTGTGATGAT TTACGCCAGT ATGGCAAACG TACTTGCACC AACGCTTAGG 
GCAAGTAACA AACTCCATTG GTTTGACAGA ACCAGCGGCG GAGTATTTTT AACCCTCGCC 
GTGATTCTGA TCAGTCGAGA CTAA
 
Protein sequence
MHPDTWLLYL FAIVLIGISP GPIAMLSMSH GIHFGKIRSI ATGLGSVSAA LILMMASAAG 
LGAVISASDY GFTLLKWCGA AYLVFLGIKL LLTKSHAAPI EVSQLKGKGT PKQLYKQAFL 
VGISNPKDLL FFAALFPQFI DISAPQVPQL TLLALTWAVV DFGFVMIYAS MANVLAPTLR 
ASNKLHWFDR TSGGVFLTLA VILISRD