Gene Spro_4901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4901 
Symbol 
ID5603308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5437861 
End bp5438280 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content55% 
IMG OID640940477 
ProductD-ribose pyranase 
Protein accessionYP_001481121 
Protein GI157373132 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1869] ABC-type ribose transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0748188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000152099 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAG GCGTGCTGCT GAATGCTGAT GTTTCTGCCG TGGTTTCCCG CCTCGGCCAT 
ACCGACCAGA TCGTCATCTG TGATGCGGGG TTGCCTATTC CGGCGGCAAC GCAGCGTATC
GATCTGGCGC TGACCCAGGG TGTACCGACG TTTTTGCAGG TGCTCGGGGT AGTGACGCAG
GAAATGCAGG TAGAGAGCGC CATTCTGGCG GAAGAGATAG TTAAACAAAA TCCGCAGCTC
CATCGTGCGT TGTTGGCTCA ACTGACCGAA CTTGGCCAAC ACCAGGGCAA TACCATCAGC
GTGAGCTATA TCAGCCACAG TGCGTTCAAA GCGCAAACTG AACATAGCCG GGCAGTGATC
CGCAGCGGGG AATGTTCGCC GTATGCGAAT GTCATCCTCT GCGCCGGCGT AACTTTCTGA
 
Protein sequence
MKKGVLLNAD VSAVVSRLGH TDQIVICDAG LPIPAATQRI DLALTQGVPT FLQVLGVVTQ 
EMQVESAILA EEIVKQNPQL HRALLAQLTE LGQHQGNTIS VSYISHSAFK AQTEHSRAVI
RSGECSPYAN VILCAGVTF