Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4901 |
Symbol | |
ID | 5603308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 5437861 |
End bp | 5438280 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640940477 |
Product | D-ribose pyranase |
Protein accession | YP_001481121 |
Protein GI | 157373132 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1869] ABC-type ribose transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0748188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000152099 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAG GCGTGCTGCT GAATGCTGAT GTTTCTGCCG TGGTTTCCCG CCTCGGCCAT ACCGACCAGA TCGTCATCTG TGATGCGGGG TTGCCTATTC CGGCGGCAAC GCAGCGTATC GATCTGGCGC TGACCCAGGG TGTACCGACG TTTTTGCAGG TGCTCGGGGT AGTGACGCAG GAAATGCAGG TAGAGAGCGC CATTCTGGCG GAAGAGATAG TTAAACAAAA TCCGCAGCTC CATCGTGCGT TGTTGGCTCA ACTGACCGAA CTTGGCCAAC ACCAGGGCAA TACCATCAGC GTGAGCTATA TCAGCCACAG TGCGTTCAAA GCGCAAACTG AACATAGCCG GGCAGTGATC CGCAGCGGGG AATGTTCGCC GTATGCGAAT GTCATCCTCT GCGCCGGCGT AACTTTCTGA
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Protein sequence | MKKGVLLNAD VSAVVSRLGH TDQIVICDAG LPIPAATQRI DLALTQGVPT FLQVLGVVTQ EMQVESAILA EEIVKQNPQL HRALLAQLTE LGQHQGNTIS VSYISHSAFK AQTEHSRAVI RSGECSPYAN VILCAGVTF
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