Gene Spro_4816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4816 
Symbol 
ID5605961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5334481 
End bp5334951 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content54% 
IMG OID640940389 
Productpreprotein translocase subunit SecB 
Protein accessionYP_001481037 
Protein GI157373048 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.348641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000175665 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGAAC AAAACAGCAC AGAGATGGCT TTCCAGATCC AGCGTATTTA CACCAAGGAT 
ATCTCCTTCG AAGCGCCAAA GGCTCCGCAG GTTTTCCAGC AGGAATGGCA GCCAGAAGTT
AAACTGGATC TAGATACCGC TTCCAGCCAG TTGGCTGATG AAGTGTATGA AGTTGTACTG
CGCGTAACCG TGACGGCCTC TCTGGGCGAA GAAACTGCGT TCCTGTGTGA AGTGCAGCAG
GCGGGTATCT TCTCCGTAGC GGGCATCGAC GGTACGCAGC TGGCGCATTG CCTGGGTGCA
TACTGCCCGA ACATTCTGTT CCCGTATGCG CGTGAGTGCA TCACCAGCCT GGTTTCTCGC
GGTACATTCC CGCAGCTGAA TCTGGCACCG GTTAACTTTG ACGCGCTGTT CATGAACTAT
CTGCAGCAGC AGTCAGAAGG CGAAGGTGCC GCACCACATC AGGATGCCTG A
 
Protein sequence
MSEQNSTEMA FQIQRIYTKD ISFEAPKAPQ VFQQEWQPEV KLDLDTASSQ LADEVYEVVL 
RVTVTASLGE ETAFLCEVQQ AGIFSVAGID GTQLAHCLGA YCPNILFPYA RECITSLVSR
GTFPQLNLAP VNFDALFMNY LQQQSEGEGA APHQDA