Gene Spro_4771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4771 
Symbol 
ID5604631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5285613 
End bp5286716 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content54% 
IMG OID640940344 
ProducttRNA (uracil-5-)-methyltransferase 
Protein accessionYP_001480992 
Protein GI157373003 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID[TIGR02143] tRNA (uracil-5-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000359767 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00383479 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGCCCG AGAATTTGCC TATTGAACGT TACGATGACC AACTGGCGGA GAAAACTGCC 
CGGCTGAAAA CGCTGATGTC TCCGTTCACG GCACCCGAGC CGGAAGTGTT CCGCTCGCCG
GTAAGCCACT ACCGCATGCG CGCCGAATTC CGCATCTGGC ATGATGAAGA CGAGATGTAC
CACATCATGT TTGATCAGCA GACCAAACAA CGCATCCGCG TCGACAAGTT TCCTGCCGCC
AGTGAATTGA TTAACCGCCT GATGAGCGCC CTGATCGCTG CCATCAAGCC GGAGCCGATT
CTGCGCCGTA AGCTTTTCCA GATTGACTAC CTGTCGACCC GCAGCGGCAA AATCATTGCC
TCACTGCTGT ATCACCGCAA GCTGGACGAC GAATGGCAGC AGCAGGCAGA AAAGCTGCGT
GATGACCTGC GCGCGCAGGG CTTTGACCTG CAGCTGATTG GCCGCGCGTC TAAAATGAAA
ATCATGCTGG ATCAGGATTA TGTAGACGAA GTGCTGCCGG TTGCCGGCCG CGACATGATC
TATCGCCAGG TGGAAAACAG CTTCACCCAG CCGAATGCGG CGCTGAATAT ACAGATGCTG
GAATGGGCGC TGGACGTCAC CACCGGTTCT AAAGGCGATT TGCTGGAGTT GTATTGCGGT
AACGGTAACT TCTCTTTGGC ATTGGCGCGT AACTTCGAGC GGGTTCTGGC TACCGAAATC
GCCAAACCTT CGGTCGCTGC GGCACAGTAC AATATTGCGG CCAACCAGAT CGATAACGTG
CAGATTATCC GTATGGCAGC GGAAGACTTT ACCCAGGCGA TGAACGGAGT GCGTGAGTTT
AATCGGTTGA AGGGTATCGA TTTAAGCAGC TATAACTGCG AAACCATTTT CGTCGATCCG
CCACGCAGTG GGCTGGACGA TGAAACGGTG AAAATGGTGC AGGCCTATCC GCGTATTTTG
TATATCTCAT GCAACCCGGA AACGCTGTGT GCCAATCTGG AGACCTTGCA GCAAACCCAC
AGCATCAGCC GCCTGGCGCT GTTCGATCAG TTCCCGTACA CCCATCACAT GGAATGCGGC
GTGCTGTTGG AAAAACGCGT CTAA
 
Protein sequence
MTPENLPIER YDDQLAEKTA RLKTLMSPFT APEPEVFRSP VSHYRMRAEF RIWHDEDEMY 
HIMFDQQTKQ RIRVDKFPAA SELINRLMSA LIAAIKPEPI LRRKLFQIDY LSTRSGKIIA
SLLYHRKLDD EWQQQAEKLR DDLRAQGFDL QLIGRASKMK IMLDQDYVDE VLPVAGRDMI
YRQVENSFTQ PNAALNIQML EWALDVTTGS KGDLLELYCG NGNFSLALAR NFERVLATEI
AKPSVAAAQY NIAANQIDNV QIIRMAAEDF TQAMNGVREF NRLKGIDLSS YNCETIFVDP
PRSGLDDETV KMVQAYPRIL YISCNPETLC ANLETLQQTH SISRLALFDQ FPYTHHMECG
VLLEKRV