| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4758 |
|---|
| Symbol | |
|---|
| ID | 5604256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 5264088 |
|---|
| End bp | 5265014 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640940324 |
|---|
| Product | branched-chain amino acid aminotransferase |
|---|
| Protein accession | YP_001480979 |
|---|
| Protein GI | 157372990 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.456918 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGA AAGCCGATTA CATTTGGTTC AATGGTGAGA TGGTTCCTTG GGCTGACGCC
AAAGTGCACG TGATGTCGCA TGCGTTGCAT TACGGCACTT CGGTGTTTGA AGGGGTCCGT
TGCTACGACT CCCATAAAGG CCCGGTGGTG TTCCGTCACC GTGAACATAT GCAGCGCCTG
CATGACTCGG CGAAAATCTA CCGTATGCCG GTATCGCAAA GCGTTGATGA ACTGATGGAA
GCCTGTCGCG CCACGCTGCG TAAAAACAAT CTGGGTAGTG CTTATATTCG CCCATTGGTG
TTTGTCGGTG ACGTCGGCAT GGGGGTTAAC CCTCCGGAAG GTTACAAAAC AGACGTGATT
ATCGCGGCGT TTCCTTGGGG CGCGTACCTG GGTGAAGAGG CGCTGGATCA AGGTATCGAT
GCGATGGTTT CGTCCTGGCA CCGCGTGGCA CCAAACACCA TCCCAACCGC GGCCAAGGCC
GGCGGTAACT ATCTTTCCTC CCTGCTGGTG GGCAGTGAAG CGCGCCGCCA CGGTTATCAG
GAAGGGATCG CGCTGGATGT GCACGGCTAT ATTTCCGAAG GCGCAGGTGA AAACCTGTTT
GAAGTGAAAG ACGGCGTGCT GTTCACCCCG CCGTTTACCT CTTCCGCGCT GCCGGGTATC
ACCCGCGATG CCATCATCAA GCTGGCGAAA GACATGGGCT TCGAAGTGCG TGAGCAAGTG
CTGTCGCGTG AGTCGCTGTA TCTGGCCGAT GAAGTGTTCA TGTCCGGTAC CGCCGCAGAA
ATTACCCCGG TTCGCAGCGT TGACGGCATC AAGGTCGGCA TTGGTAAATG CGGCCCGGTG
ACCAAACAGA TCCAACAGGC GTTCTTTGGC CTGTTTACCG GCAAGACCGA AGACAAATAT
GGTTGGCTGG ATCCGGTAAA TCCATAA
|
|---|
| Protein sequence | MTKKADYIWF NGEMVPWADA KVHVMSHALH YGTSVFEGVR CYDSHKGPVV FRHREHMQRL
HDSAKIYRMP VSQSVDELME ACRATLRKNN LGSAYIRPLV FVGDVGMGVN PPEGYKTDVI
IAAFPWGAYL GEEALDQGID AMVSSWHRVA PNTIPTAAKA GGNYLSSLLV GSEARRHGYQ
EGIALDVHGY ISEGAGENLF EVKDGVLFTP PFTSSALPGI TRDAIIKLAK DMGFEVREQV
LSRESLYLAD EVFMSGTAAE ITPVRSVDGI KVGIGKCGPV TKQIQQAFFG LFTGKTEDKY
GWLDPVNP
|
|---|
| |