| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4742 |
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| Symbol | |
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| ID | 5603895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 5244279 |
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| End bp | 5246273 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640940308 |
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| Product | RNase II stability modulator |
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| Protein accession | YP_001480963 |
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| Protein GI | 157372974 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.632651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCGCAG ACCAAGGCCC TATGCTTCTT AACGCTCACT TCGGCACCAA CAGCCCTTAT
TGGCGGTTGG CGTTTGACAG CAATGCGTTG GCGTTGTCGG CAGTCAAAGG TAAAACTCAT
ATGGCCGTGG CGCTCAGCGC CATGCAGGCG GCTAAAATCC GTCGCCTGAG CGGCATTACC
GCCAGCCTTG ATATCACCAT CACGCTCGGC GGCGAACCGA TACATCTGCA TCTGGTCGGC
CGACGAGTCA ACAATCTGGA ATGGGCAGGC ACCGCTTCCG CCTTCAGCGA CACCCAATCG
GTCGCCCGTG ACCTGGTACA CGGCCTATCC TTTGCCGAGC AGGTGGTGTC CGAAGCCAAC
TCCGTGATTG TGATTGTCGA TCAACACGGC CGCATTCAGC GTTTCAACCG CCTGAGCGAA
GAGTACACCG GCCTGCACGA ACATGATGTT ATTGGTAAAA ACGTCTTTCA ATTATTTATG
AGCCCGGAGG AAGCCTCGGC ATCACGGCGC AACATCGCCG GTTTTTTCCG TAATGGTTCC
TCCTATGAGG TAGAACGCTG GATCAAAACG GTGAAAGGCG AGCGGCTGTT TTTGTTCCGC
AACAAGTTCG TCCACAGCGG CAGCGGCAAA AATGAAGTTT TTTTGATTTG CTCCGGTACC
GATATCACCG AAGAACGCCG CGCCCAGGAA CGTCTGCGGG TGCTGGCCAA TACCGACATC
ATTACCGGCC TGCCCAATCG CAATGCCATT CAGGACAAAA TAACCCAGTC GATCGCCACT
CGCGATGGCC ACAGTGTTGG CCTGGTGTAC CTCGATCTCG ACAATTTTAA AAAGGTTAAC
GACGCCTACG GCCATATGTT CGGCGACCGT TTATTGGTAG AGGTGTCGCT GGCGGTGCTC
GGCTGTCTGG ATAACGACCA AACCCTGGCC CGCCTGGGTG GCGATGAATT CCTGGTGCTG
GCCCAGCAGG CCGACCGCGA AATGCTGCAA CGCCTGGCCC AGCGCATTAT CGACCGGCTG
AAAACGCCGT TCCGCATAGG GCTTATCGAA GTTTATACCG GCTGTTCTAT TGGTATCGCA
CTGTGTCCCG AACACGGCAA CGACCTCGAC AGCCTGATCC GCAGTGCCGA CACCGCCATG
TATGTCGCCA AAGAGCATGG CAAACGGACC TATACCGTGT TCTCGCCAGA AATGAATAAA
CGCGTCGCGG AATACATGTG GCTGGACACC AACCTGCGTA AGGGATTGGA ACAAAATCAA
CTGGTGGTGT ATTACCAGCC AAAAATAGAG GCGCTCAGCG GCAGGGTATG TAGCGTGGAA
GCGCTGGTGC GCTGGGATTC CCCCGAGCGC GGCCTGATCC CGCCGCTGCA GTTTATCTCT
TACGCGGAAG AGTCTGGTCT GATCGGCCCA CTCGGCCGTT GGGTGCTGCA AACCGCCGCC
AAACAGGCCG CTCAGTGGCA ACGACAGGGG TTGCAACTGC GGGTCGCGGT CAATCTTTCC
GCCCGCCAGT TGGTGGATGA CTCTATCGTT GAAGATCTGG CGCAGGTGTT GCAGCACAAT
CAGTTGACCC CCTGCCTGCT GGATTTTGAA CTCACGGAAA GCAGCCTGAT TGAGGATGAG
AAACGCGCTC GCGAAGTGAT CACCCGGCTA CGCGAGCTGG GCGCACAGGT CCATCTTGAT
GATTTTGGCA CCGGCTACTC TTCGCTGGCG CAGCTGGCGC GTATTCCGCT GGATGCGATT
AAGCTGGATA AAAGCTTTGT GCGCGGAGTG AATGATAATC CGGTTTCACA ATCGCTGGTG
CGTGCCATCG TCGCGGCGGC CGAAGCGCTT AAATTCCGGG TGATCGCCGA AGGCGTGGAA
ACAGAAAGCG AAAATCGGTT CCTCGATGAA ATCGGCGTGG ATGAAAAACA GGGGTTCCTG
TTTGCGCGGC CAATGCTCCC GGAACAGCTG GAGCATTGGC TGCAGTCTTA TCGCCCGCCA
TCCTCCTCAG CGTGA
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| Protein sequence | MFADQGPMLL NAHFGTNSPY WRLAFDSNAL ALSAVKGKTH MAVALSAMQA AKIRRLSGIT
ASLDITITLG GEPIHLHLVG RRVNNLEWAG TASAFSDTQS VARDLVHGLS FAEQVVSEAN
SVIVIVDQHG RIQRFNRLSE EYTGLHEHDV IGKNVFQLFM SPEEASASRR NIAGFFRNGS
SYEVERWIKT VKGERLFLFR NKFVHSGSGK NEVFLICSGT DITEERRAQE RLRVLANTDI
ITGLPNRNAI QDKITQSIAT RDGHSVGLVY LDLDNFKKVN DAYGHMFGDR LLVEVSLAVL
GCLDNDQTLA RLGGDEFLVL AQQADREMLQ RLAQRIIDRL KTPFRIGLIE VYTGCSIGIA
LCPEHGNDLD SLIRSADTAM YVAKEHGKRT YTVFSPEMNK RVAEYMWLDT NLRKGLEQNQ
LVVYYQPKIE ALSGRVCSVE ALVRWDSPER GLIPPLQFIS YAEESGLIGP LGRWVLQTAA
KQAAQWQRQG LQLRVAVNLS ARQLVDDSIV EDLAQVLQHN QLTPCLLDFE LTESSLIEDE
KRAREVITRL RELGAQVHLD DFGTGYSSLA QLARIPLDAI KLDKSFVRGV NDNPVSQSLV
RAIVAAAEAL KFRVIAEGVE TESENRFLDE IGVDEKQGFL FARPMLPEQL EHWLQSYRPP
SSSA
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