Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4717 |
Symbol | |
ID | 5603425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 5213811 |
End bp | 5214353 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640940283 |
Product | fimbrial protein |
Protein accession | YP_001480938 |
Protein GI | 157372949 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0885059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATCA TCAGAAACCT GTCCCCCAGC CTGCTGGCCG GCTGGATGAT TGCTGTGAGC ATACAGCTTG CTGCTGCGGC AAGTAATAAC CTGAAACTGC ACGGCGCCCT GGTGGCGGAG CCCTGCACGT TACAACCTGG GGATGAAAGT ATCGAACTGG ATTTTGGCAC TCTGGTGGAT AAATATTTAT ATAAAAATCA GCGAACGCAC AGCAAGACTA TTCAGTTACG GCTGGCGGAT TGTGACACCA GCTTGGGCAA AACGGTGAAG GTCAGTTTCG GTGGTGCTGA AAGTGTGGCA TTACCCGGCC TGTTGGCGCT GGACGTCGGC AGCCAGGCAC AGGGCGTCGC TGTCGGTTTT GAAACGCCGC AGGGCCAACC GCTGCCGTTA AACCGCTGGA GTCAGGACAG CACATTGACC AGCGGCAATA ATATTGTCGC CATGCAGGCC TATGTACAGG CCGAACCTGC CGCTATAGCC AATAAAACTC TTCAACTGGG GACATTTTCT GCAGTGGCGA CTTTTGCATT GTACTATGAG TGA
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Protein sequence | MRIIRNLSPS LLAGWMIAVS IQLAAAASNN LKLHGALVAE PCTLQPGDES IELDFGTLVD KYLYKNQRTH SKTIQLRLAD CDTSLGKTVK VSFGGAESVA LPGLLALDVG SQAQGVAVGF ETPQGQPLPL NRWSQDSTLT SGNNIVAMQA YVQAEPAAIA NKTLQLGTFS AVATFALYYE
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