Gene Spro_4717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4717 
Symbol 
ID5603425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5213811 
End bp5214353 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content54% 
IMG OID640940283 
Productfimbrial protein 
Protein accessionYP_001480938 
Protein GI157372949 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0885059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCA TCAGAAACCT GTCCCCCAGC CTGCTGGCCG GCTGGATGAT TGCTGTGAGC 
ATACAGCTTG CTGCTGCGGC AAGTAATAAC CTGAAACTGC ACGGCGCCCT GGTGGCGGAG
CCCTGCACGT TACAACCTGG GGATGAAAGT ATCGAACTGG ATTTTGGCAC TCTGGTGGAT
AAATATTTAT ATAAAAATCA GCGAACGCAC AGCAAGACTA TTCAGTTACG GCTGGCGGAT
TGTGACACCA GCTTGGGCAA AACGGTGAAG GTCAGTTTCG GTGGTGCTGA AAGTGTGGCA
TTACCCGGCC TGTTGGCGCT GGACGTCGGC AGCCAGGCAC AGGGCGTCGC TGTCGGTTTT
GAAACGCCGC AGGGCCAACC GCTGCCGTTA AACCGCTGGA GTCAGGACAG CACATTGACC
AGCGGCAATA ATATTGTCGC CATGCAGGCC TATGTACAGG CCGAACCTGC CGCTATAGCC
AATAAAACTC TTCAACTGGG GACATTTTCT GCAGTGGCGA CTTTTGCATT GTACTATGAG
TGA
 
Protein sequence
MRIIRNLSPS LLAGWMIAVS IQLAAAASNN LKLHGALVAE PCTLQPGDES IELDFGTLVD 
KYLYKNQRTH SKTIQLRLAD CDTSLGKTVK VSFGGAESVA LPGLLALDVG SQAQGVAVGF
ETPQGQPLPL NRWSQDSTLT SGNNIVAMQA YVQAEPAAIA NKTLQLGTFS AVATFALYYE