Gene Spro_4625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4625 
Symbol 
ID5603960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5101500 
End bp5102363 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content57% 
IMG OID640940191 
Product5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 
Protein accessionYP_001480846 
Protein GI157372857 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCT GCCGCTTCAA TCACGACCGG ATAGGGATCA TCCGGCAGCA GCGGGTGTAC 
GACATCACGC CAATGTTTCA CGACATCCCC CCCGCCCACT GGCCCACACC GCCTGTCGAC
TGGATGATTA GCCATTTCCC CGACATTGCC TCACAGCTGG GTGCAAACTG GGAACGGCTG
GAAAACTACC CGCTGGAGCA GGTAAGCCTG AACGCACCGG TGGCCAATCC CGGAAAAATT
GTCGCTGCGC CAATTAATTA CCGCGATCAT ATTGCCGAAG CCAATGCCGA CCAGCAAATC
AACCATGGCA AGGTCTATAC CGATATCAGC GAATACGGTC TGTTTCTCAA GGCCAACAGC
TCATTGTGCG GGCCGAACGA AATCATACCT CTGCCAATCC CCGGCCGACG AACCGATCCA
GAGGTCGAAC TGGCGGTGAT CATTGGTCAA CGTGCCCGGA ACTTGCCCGT CGATCAGGCG
CTGGAGGCGG TGTTCGGTTA CGCTATCGGC ATAGACATGA CCGTGCGGGG CTCGGAGTTT
CCCTCTTTTC GTAAATCGGC CGATGGGTTT TCGGTACTCG GCCCGTGGAT TGTCACCCCT
GACGAAATCG GCGATCCGAA CACCCTGGAT CTCAGCATTC GGGTCAACGG CCAACTCAGA
CAGCACTCCA ACACCCGCCA CCTGATTTAT AACGTACAAC GCCTGATCGC CTATGCCTCG
GCGATGTTTA CCCTGTGGCC GGGAGACGTG ATTTATACTG GTACGCCGTC TGGGGTCTCC
GCGATACAGG CTGGCGACCG CATCGAGGTC AGTATCGAGC GCATAGGTGC GATGTCGGTC
ACGATCGCCG ACAGCGTCCC CTGA
 
Protein sequence
MKICRFNHDR IGIIRQQRVY DITPMFHDIP PAHWPTPPVD WMISHFPDIA SQLGANWERL 
ENYPLEQVSL NAPVANPGKI VAAPINYRDH IAEANADQQI NHGKVYTDIS EYGLFLKANS
SLCGPNEIIP LPIPGRRTDP EVELAVIIGQ RARNLPVDQA LEAVFGYAIG IDMTVRGSEF
PSFRKSADGF SVLGPWIVTP DEIGDPNTLD LSIRVNGQLR QHSNTRHLIY NVQRLIAYAS
AMFTLWPGDV IYTGTPSGVS AIQAGDRIEV SIERIGAMSV TIADSVP