| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4596 |
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| Symbol | nirD |
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| ID | 5607049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 5071855 |
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| End bp | 5072181 |
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| Gene Length | 327 bp |
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| Protein Length | 108 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640940162 |
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| Product | nitrite reductase small subunit |
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| Protein accession | YP_001480817 |
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| Protein GI | 157372828 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
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| TIGRFAM ID | [TIGR02378] nitrite reductase [NAD(P)H], small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCAGT GGACAACCCT TTGCGCCATC ACCGATATTC TGCCTGGCAC CGGCGTGTGT
GCCCTGGTCG GCGACCAACA GGTGGCGATT TTCCGCCCCT TTGCCGACGA GCAGGTGTTT
GCCATCAGCA ATATTGATCC CTTCGCCCAG GCCAGCGTGT TGTCACGTGG GCTGATTGCC
GAACATCAGG GTGAGCTGTG GGTCGCCAGC CCGCTAAAAA AACAGCATTT CCGCCTGCAC
GACGGCTACT GTCTGGAAGA TGACAGTCGC TGCGTCGCGC ATTTCACCAG CCGGGTTGTG
GACGGCATGG TACAGGTCGC GGCCTGA
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| Protein sequence | MSQWTTLCAI TDILPGTGVC ALVGDQQVAI FRPFADEQVF AISNIDPFAQ ASVLSRGLIA
EHQGELWVAS PLKKQHFRLH DGYCLEDDSR CVAHFTSRVV DGMVQVAA
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