Gene Spro_4493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4493 
Symbol 
ID5607120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4979034 
End bp4979927 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content51% 
IMG OID640940055 
Productputative hydrolase 
Protein accessionYP_001480715 
Protein GI157372726 
COG category[R] General function prediction only 
COG ID[COG1735] Predicted metal-dependent hydrolase with the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.140472 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTTT CAACGCAATT CGATAGCCGT GGTTATACCT ATGCGCACGA GCATCTGCAT 
ATCGACCTGT CGCCATTCAA GCAGGATATG GATTGCAGGC TGGATTGTTA CGCTTTGCTC
GTCGATGAAA TGAGGACGCT GGTCAGTAAA GGCGTTCTCA ACCTGGTTGA GGTCACCAAT
CGCTATATGG GACGCAACCC GCAATTTATG CTGGATCTGA TGCAAGAAAG CGGCATTAAC
ATCCTGGCGT CAACCGGATA CTACCAACAG GAGTTCTACC CGCCACATGT CGCGCAACGT
AGCGCGCAGC AATTGGCGCA GGAAATGATC GACGAAATAG AACAGGGCAT TGACGGCACA
GAGTTACGTG CAAGCGTCAT CGCAGAAATA GGCAGCAGTG AAGGCACCAT TACCCCGACG
GAAGAAAAAG TGTTTCACGC CGCCGCATTG GCACATTTGG CGACCGGTAA ACCTATTTCG
ACCCACACCA GTTTCAGCAC CATGGGGCTG GAGCAGCTAC GGCTATTAAC CGGCTACGGG
GTGGCCGCAG AGCATATTGT TATCGGCCAT TGCGATCTTC GCGATCAGTG GGAAACGTTA
CTACGCATTC TGGATACCGG TGCGTTAATT CAATTCGATA CCATCGGGAA AAATAATTAT
TACCCAGACG AAAAACGTGT GGCTACCTTA CTGGCACTCG CTCAACGGGG TTTATCAGGT
CAGGTCATGC TCTCCATGGA TATCACCCGG CGCTCACACC TGGCGGCCAA CGAAGGCCCA
GGGTTCAGCT ACCTCATTGA TACGTTCATT CCCATGTTAT TACAGGCGGG GATCCACCAG
CGGGATATTG ACCTTATGCT GCGCGATAAC CCCAATACAT TCTTCAAAGG ATAA
 
Protein sequence
MDLSTQFDSR GYTYAHEHLH IDLSPFKQDM DCRLDCYALL VDEMRTLVSK GVLNLVEVTN 
RYMGRNPQFM LDLMQESGIN ILASTGYYQQ EFYPPHVAQR SAQQLAQEMI DEIEQGIDGT
ELRASVIAEI GSSEGTITPT EEKVFHAAAL AHLATGKPIS THTSFSTMGL EQLRLLTGYG
VAAEHIVIGH CDLRDQWETL LRILDTGALI QFDTIGKNNY YPDEKRVATL LALAQRGLSG
QVMLSMDITR RSHLAANEGP GFSYLIDTFI PMLLQAGIHQ RDIDLMLRDN PNTFFKG