Gene Spro_4484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4484 
Symbol 
ID5603090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4967272 
End bp4968264 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content59% 
IMG OID640940046 
ProductABC transporter-related protein 
Protein accessionYP_001480706 
Protein GI157372717 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.495687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTATC TCAACGTGAC CCGCCTTAAC AAACACTACG GCCAGACCCA GGTATTTCAG 
GATATCGATT TCACTGCCGA AGAAGGTGAG TTTGTCACGC TGCTCGGGCC GAGCGGCTGC
GGCAAGTCTA CGCTGCTGCG CTGTCTGGCG GGCCTGACTT CGGTCGACAG CGGGCAGATC
CTGCTGCAGG GGCAGGATCT GGTGCCGGTG CCGCCGCAAA AACGCGGTAT CGGCATGGTG
TTTCAGAGCT ATGCGTTATT CCCGAACATG ACCGTTGAAG GCAACGTGGC ATTCGGCCTG
AAAATGCAAA AGCTGGCGAC CGGGCAGATC CAGCAGCGGG TGCAGGAGGT GCTGGCACTG
GTGGAACTGA CCGAACTGGC GAAGCGCTAT CCGCATCAGC TTTCCGGCGG CCAGTGCCAA
CGGGTGGCGC TGGCGCGATC CCTGGTGACG CGTCCACGTT TGTTACTGCT CGATGAACCG
CTCTCGGCGC TGGATGCCCG TATCCGCAAA CACCTGCGCG AACAGATCCG TCGGATCCAG
CGTGAGCTGA ACCTGACGGC GATCTTTGTC ACCCACGATC AGGAAGAGGC GCTGACGCTG
TCGGATCGCA TCGTGCTGAT GAACAAGGGG CAAATTGTAC AAAGTGGCGA TGCGGAAACC
TTATACACCC AACCGGCCGA CGTTTTCGCC GCCGGGTTTA TCGGCAACTA CAATCTGCTG
AGCGCCGAAC AGGCGTCCGT TTTGACCGGC AACACTTATC GCGGTAAGGT GGCTGTTCGC
CCGGAGTCCA TGACCTTACT GCCTGCCGGG CAGGGTATCG CCGCCACTAT CCTTAACCAC
AGCCTGCTGG GCAACGTGGT GCGCTATCGG GTTAAGGCCC GCGGCGTAGA GTTGCTGGTC
GACGTGCTCA ACCGCTCGGT TGAGGATTTG CGGCCCGACG GCAGTGAAAT TGGACTACAC
TTAGAAACTG TTACATTACG GGAAGTTGCA TGA
 
Protein sequence
MAYLNVTRLN KHYGQTQVFQ DIDFTAEEGE FVTLLGPSGC GKSTLLRCLA GLTSVDSGQI 
LLQGQDLVPV PPQKRGIGMV FQSYALFPNM TVEGNVAFGL KMQKLATGQI QQRVQEVLAL
VELTELAKRY PHQLSGGQCQ RVALARSLVT RPRLLLLDEP LSALDARIRK HLREQIRRIQ
RELNLTAIFV THDQEEALTL SDRIVLMNKG QIVQSGDAET LYTQPADVFA AGFIGNYNLL
SAEQASVLTG NTYRGKVAVR PESMTLLPAG QGIAATILNH SLLGNVVRYR VKARGVELLV
DVLNRSVEDL RPDGSEIGLH LETVTLREVA