| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4464 |
|---|
| Symbol | ubiC |
|---|
| ID | 5607083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 4936619 |
|---|
| End bp | 4937143 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640940026 |
|---|
| Product | chorismate pyruvate lyase |
|---|
| Protein accession | YP_001480686 |
|---|
| Protein GI | 157372697 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGCA ATAGGGATTC GATCCTACCG CCGCTGGAGT GGCTATCCGC GCAACATCCT
CCGGCACCCG CCGCCGTCAG CGATTGGCTG ATGGAACCAG GTTCCATGAC GCGCCGCTTT
GAACGCCACT GTGGGCGGGT GCACGTCGAA CCGCAGCGCG AATGTTTTGT TACCCGCGAC
CAACTGGGGG AAGAGGCAGA ACACCTGCCG GACAGTCCGC GCTATTGGCT GCGTGAAGTT
GTGTTGTTGG GCGATAACCA GCCCTGGCTA TTGGGGCGTA CGGTGATCCC GTTGGAAACT
CTGACCGGCC CTGATCTGGC ATTGGTGGAT TTGGGTACCT TGCCACTGGG CCGCTATCTG
TTCAGCAGCG ATGAACTGAC TCGCGATTAC ATTCATATTG GACGGCAAGA TGCACTGTGG
GCGCGCCGTT CCCGCCTGCG GCTGGCGGGT AAGCCGCTGT TGCTGACCGA ACTGTTTTTA
CCGGCTTCGC CGCTGTACGC GACAGGAAGT TCGGTTCCCG AATGA
|
|---|
| Protein sequence | MSGNRDSILP PLEWLSAQHP PAPAAVSDWL MEPGSMTRRF ERHCGRVHVE PQRECFVTRD
QLGEEAEHLP DSPRYWLREV VLLGDNQPWL LGRTVIPLET LTGPDLALVD LGTLPLGRYL
FSSDELTRDY IHIGRQDALW ARRSRLRLAG KPLLLTELFL PASPLYATGS SVPE
|
|---|
| |