| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4454 |
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| Symbol | |
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| ID | 5604300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 4927194 |
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| End bp | 4927727 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640940016 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001480676 |
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| Protein GI | 157372687 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGTT TCGTTAAACG CCTGCTGTTA CCAGTCATTG CCGGTTCTCT GCTGTTTTCC
GGGGCGGCCC TGGCAATGGG CGGTGATGAT AGCGGTCAGA CCACCCCAAC CTGCCCGAAA
GGCCAGATAT ACGATACAAA AACCAAGACC TGCATGGTGG AAAAAAGCAG CATGATCGAC
GACAACGATC GGGCTAACTA TGCCTATGCG CTGGCAAAAA GCGGTCGTTA CCAGGAGGCG
CTCGACGTGC TCAATACCCT GAAGGATCCT AACACCGCGG TTGCACTGAA CTACCGCGGT
TACGCTACCC GCAAGCTCGG CCGCACCGAT GAAGGGATCG GCTACTATTT AAAATCAGTC
GCGCTCGATC CGAAATACCC GAAAGTCCGT GAATATCTGG GTGAGGCCTA TATGGTCAAG
GGCCGTCAGG ATTTGGCGAA AGAACAACTG AAGGTGATCC AGTCGCTATG CGGTACCGGT
TGTGAAGAGT ACCGCGATCT GGCGGCAGCC ATCGATCACC ACCCAGAATC ATGA
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| Protein sequence | MNSFVKRLLL PVIAGSLLFS GAALAMGGDD SGQTTPTCPK GQIYDTKTKT CMVEKSSMID
DNDRANYAYA LAKSGRYQEA LDVLNTLKDP NTAVALNYRG YATRKLGRTD EGIGYYLKSV
ALDPKYPKVR EYLGEAYMVK GRQDLAKEQL KVIQSLCGTG CEEYRDLAAA IDHHPES
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