Gene Spro_4279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4279 
Symbol 
ID5604827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4744031 
End bp4744831 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content57% 
IMG OID640939839 
Productphosphotransferase system PTS sorbose-specific IIC subunit 
Protein accessionYP_001480501 
Protein GI157372512 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTTTG AAGCGACGCT TATCGGGATA CTTTGTTATC TCGGTGCGCT GAGCAGCCCC 
TGGCTGCTGG GACTGACCGG AGGCTGGTAT ATCCTCAGCC GTCCGCTGGT CTCCGGCATG
CTGGTGGGGG CTATCCTCGG CGATGTGCAG ACCGGCATTA TCATCGGTGT TGCGGTTCAG
GCGGTGTATA TCGCCATGGT AACACCGGGC GGATCGATGC CGGCCGATCT CAATTTTGTG
GCGTTCCCGG CGATTGCGTT GGGCATTCTT TCCGGTAAGG GAACCGAGGT GGCGGTGGCG
CTGGCGGCGA CTATCGGCAT CATGGGCACC GTGCTGTTCA ACGCCATGAT GGTGCTCAAT
TCTTACTGGA ATCACCGCGC GGACCTGGCG GTAGAGCGCG GCGATGAGCG GGGGATTTAC
CTCAATAGCG CCATCTGGCC GCAGGTCACC AACTTCCTGT TGCGGTTTAT ACCGACGTTC
ATCGCGGTCT TTTTCGGGGC GCGCTATATC AATGCCTTTA TGGACAGCCT GCCGGCGCTG
GTGTTGACTA CCATGAACGT GGTGGGCGGT ATTCTGCCTG CGGTCGGCAT CGCTATTCTT
CTCAAACAGA TAATTAAAAG CTACAGCATG CTGATTTACT TCCTGGTGGG GTTCATCTGC
ATTGTTTTCC TCAAGCTGAA TATGGTGGCG CTGGTGATTG TCGGCGCACT GCTGGCACTT
ATTCACTACA ACTATAAGCC AGAGCCGCAG GTGGCCGCCG CACAGGGCAC GCCTCAGGCT
GATGATGAGG ATGAATTCTG A
 
Protein sequence
MWFEATLIGI LCYLGALSSP WLLGLTGGWY ILSRPLVSGM LVGAILGDVQ TGIIIGVAVQ 
AVYIAMVTPG GSMPADLNFV AFPAIALGIL SGKGTEVAVA LAATIGIMGT VLFNAMMVLN
SYWNHRADLA VERGDERGIY LNSAIWPQVT NFLLRFIPTF IAVFFGARYI NAFMDSLPAL
VLTTMNVVGG ILPAVGIAIL LKQIIKSYSM LIYFLVGFIC IVFLKLNMVA LVIVGALLAL
IHYNYKPEPQ VAAAQGTPQA DDEDEF