Gene Spro_4002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4002 
Symbol 
ID5604428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4436782 
End bp4437576 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content51% 
IMG OID640939562 
ProductS-adenosylmethionine decarboxylase 
Protein accessionYP_001480225 
Protein GI157372236 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1586] S-adenosylmethionine decarboxylase 
TIGRFAM ID[TIGR03331] S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCATAAGC TAAAACTGCA CGGCTTCAAC AACCTGACCA AGAGCCTGAG TTTTTGTATT 
TACGATATTT GTTACGCCAA AACCGCGGAT GACCGCGCTG GCTATATCGC CTACATTGAC
GAGCAATACA ACGCCAATCG CCTGACCGAG ATCCTGAGCG AAACCTGCTC GATCATTGGC
GCCAATATTC TGAACATTGC CCGCCAGGAC TATGAACCTC AGGGTGCCAG CGTGACCATT
CTGGTCAGCG AAGAGCCGGT GGATCCGAAC GATGTCGATA CCTCGGAACA CCCAGGCCCG
CTGTCAAAAA CGGTGGTTGC CCACCTGGAC AAGAGCCACA TCTGCGTTCA TACCTATCCG
GAGAGCCATC CGGAAGGTGG TTTGTGCACT TTCCGCGCCG ATATCGAAGT GTCGACCTGC
GGCGTGATTT CACCGCTTAA AGCGCTGAAT TACCTGATCC ACCAGTTGGA ATCCGACATC
GTTACCATGG ACTACCGCGT GCGTGGCTTT ACCCGCGACG TGAACGGCGT GAAGCATTAC
ATCGATCATG AGATCAACTC GATCCAGAAC TTTATGTCTG ATGATATGAA GGCGCTGTAC
CACATGATGG ACGTGAATGT TTATCAGGAG AACATCTTCC ATACCAAGAT GTTGCTGAAG
GATTTCGATC TGAAGCACTA CCTGTTTAAC GCCAAACCGG ATGCGCTGAG TGCCGCCGAA
CGTAAAGAGA TTACCGATCT GCTGTGGAAA GAGATGCAGG AAATCTACTA CGGGCGCAAT
ATTCCGCATC TGTGA
 
Protein sequence
MHKLKLHGFN NLTKSLSFCI YDICYAKTAD DRAGYIAYID EQYNANRLTE ILSETCSIIG 
ANILNIARQD YEPQGASVTI LVSEEPVDPN DVDTSEHPGP LSKTVVAHLD KSHICVHTYP
ESHPEGGLCT FRADIEVSTC GVISPLKALN YLIHQLESDI VTMDYRVRGF TRDVNGVKHY
IDHEINSIQN FMSDDMKALY HMMDVNVYQE NIFHTKMLLK DFDLKHYLFN AKPDALSAAE
RKEITDLLWK EMQEIYYGRN IPHL