| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3984 |
|---|
| Symbol | |
|---|
| ID | 5602860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 4419863 |
|---|
| End bp | 4420570 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640939544 |
|---|
| Product | sugar fermentation stimulation protein |
|---|
| Protein accession | YP_001480207 |
|---|
| Protein GI | 157372218 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
|---|
| TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000401699 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTTT CGCCACCGTT GCACCACGCC ACGCTGATTA AACGTTACAA ACGCTTTCTG
GCGGACGTCA TTACCCCGGA AGGGGAAACC TTCACCCTGC ACTGCGCCAA TACCGGTGCC
ATGACCGGCT GTGCCACGCC TGGCGATACC GTCTGGTATT CCACCTCGGA TAACCCCAAA
CGTAAATATG CCCACAGCTG GGAACTGACG CATACCCAAC AGGGGGACTG GATCTGCGTG
AACACCCTGC GTGCCAACAC CCTGGTACGT GAGGCGATCG AACAGAATCT AGTCAATGAA
TTATCCGGTT ACAGTAAAAT AAGCAGCGAA GTAAAATATG GCAGCGAAAG CAGTCGTATC
GATTTGTTAT TACAGGCAGA AGATCGCGCT AACTGCTATA TTGAAGTTAA GTCAGTCACA
TTATTGCAAC AACAACGTGG TTACTTCCCT GATGCGGTAA CGCTCAGAGG ACAGAAGCAC
TTACGTGAGT TGCTAAGCGT GGTTGAAAGC GGGCAACGGG CGGTATTGTT CTTTGCTGTG
TTACATAGCG GTATTGAGCA GGTCGCACCG GCACATCATA TAGATGAGCG TTATGCGACA
CTGTTGGCAC AGGTTCAGCA GTTGGGCGTA GAAGTGGTTT GCTATGGGGC TAAATTATCA
CCTGACGGTA TATATCTCTG CGATAAGTTA CCGTTTTTTA TCGATTAG
|
|---|
| Protein sequence | MIFSPPLHHA TLIKRYKRFL ADVITPEGET FTLHCANTGA MTGCATPGDT VWYSTSDNPK
RKYAHSWELT HTQQGDWICV NTLRANTLVR EAIEQNLVNE LSGYSKISSE VKYGSESSRI
DLLLQAEDRA NCYIEVKSVT LLQQQRGYFP DAVTLRGQKH LRELLSVVES GQRAVLFFAV
LHSGIEQVAP AHHIDERYAT LLAQVQQLGV EVVCYGAKLS PDGIYLCDKL PFFID
|
|---|
| |