Gene Spro_3846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3846 
Symbol 
ID5606393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4256620 
End bp4257399 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content59% 
IMG OID640939406 
Productphosphotransferase system PTS sorbose-specific IIC subunit 
Protein accessionYP_001480070 
Protein GI157372081 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3715] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.977465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACTG ATGCGTTATT GATTGCACTG CTGGCCGGGC TGGCGGGGGT CGATCTGTTC 
GACGGCCTGA CCCACTTCCA TCGTCCTGTG GTTCTGGGGC CGCTGGTCGG CCTGATCCTC
GGGGATGTCT ACACCGGCCT GCTGGTCGGC GGCACGCTGG AACTGGTGTG GATGGGCATG
GTGCCGCTGG CGGGGGCTCA GCCGCCGAAC GTGGTGATCG GCGGGGTGAT TGGCACGGCG
TTCGCCATTC TTACCAAAGC CGATCCCAAG GTGGCGATTG GCGTTGCGGT GCCGTTTTCG
ATTGCGGTGC AGGGCTGTAT CACGCTGCTG TTCACCCTGT TTTCACCGAT GATGCATCGC
TGCGATCGCA TGGTGAAAGA ACTGAACTGG CGCGGTATTG AACGGGTGAA CTATCTCGGT
ATCACCATCC TGTTCGCGTT CTATTTCGTG GTGGCGTTTC TGCCGATTTA TTTCGGCGCC
GATGCGGCCA GCGCCATGGT GCAAAAGGCC CCGGTCTGGC TGTTGGACGG CCTGGCGGTG
GCGGGGGGCA TGATGCCGGC GATTGGTTTC TCACTGCTGA TGAAAGTGAT GATGAAAAAA
ACCTATGTGG CCTATTTCAT CCTCGGTTTT ATTTCCGTCA CCTTCCTGAA ACTGCCGATA
CTGGCCGTGG CGCTGGGCGC GCTGGCGATC GCCCTGATCG ACTTCTTTAA CAGTCAACGG
GCCGCTGCCG ACCCGCTCAA ACAACCTGTA CCCCAGGAGG ATGCTGAAGA TGGCATTTAA
 
Protein sequence
MLTDALLIAL LAGLAGVDLF DGLTHFHRPV VLGPLVGLIL GDVYTGLLVG GTLELVWMGM 
VPLAGAQPPN VVIGGVIGTA FAILTKADPK VAIGVAVPFS IAVQGCITLL FTLFSPMMHR
CDRMVKELNW RGIERVNYLG ITILFAFYFV VAFLPIYFGA DAASAMVQKA PVWLLDGLAV
AGGMMPAIGF SLLMKVMMKK TYVAYFILGF ISVTFLKLPI LAVALGALAI ALIDFFNSQR
AAADPLKQPV PQEDAEDGI